Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf111Q99ML9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rnf111Q99ML9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf111Q99ML9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.13■■□□□ 1.29
Rnf111Q99ML9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf111Q99ML9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf111Q99ML9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf111Q99ML9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Rnf111Q99ML9 Gm45855-201ENSMUST00000212546 880 ntBASIC23.11■■□□□ 1.29
Rnf111Q99ML9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf111Q99ML9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf111Q99ML9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf111Q99ML9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf111Q99ML9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf111Q99ML9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf111Q99ML9 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.08■■□□□ 1.29
Rnf111Q99ML9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf111Q99ML9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf111Q99ML9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf111Q99ML9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.07■■□□□ 1.28
Rnf111Q99ML9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf111Q99ML9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf111Q99ML9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf111Q99ML9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf111Q99ML9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.04■■□□□ 1.28
Rnf111Q99ML9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf111Q99ML9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.03■■□□□ 1.28
Rnf111Q99ML9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Rnf111Q99ML9 Gm24970-201ENSMUST00000175582 82 ntBASIC23.02■■□□□ 1.28
Rnf111Q99ML9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf111Q99ML9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf111Q99ML9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf111Q99ML9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rnf111Q99ML9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rnf111Q99ML9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23■■□□□ 1.27
Rnf111Q99ML9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23■■□□□ 1.27
Rnf111Q99ML9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rnf111Q99ML9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23■■□□□ 1.27
Rnf111Q99ML9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rnf111Q99ML9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rnf111Q99ML9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23■■□□□ 1.27
Rnf111Q99ML9 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.99■■□□□ 1.27
Rnf111Q99ML9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Rnf111Q99ML9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rnf111Q99ML9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rnf111Q99ML9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rnf111Q99ML9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rnf111Q99ML9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rnf111Q99ML9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.98■■□□□ 1.27
Rnf111Q99ML9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rnf111Q99ML9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rnf111Q99ML9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf111Q99ML9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.97■■□□□ 1.27
Rnf111Q99ML9 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.97■■□□□ 1.27
Rnf111Q99ML9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf111Q99ML9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rnf111Q99ML9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rnf111Q99ML9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.96■■□□□ 1.27
Rnf111Q99ML9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rnf111Q99ML9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rnf111Q99ML9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rnf111Q99ML9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rnf111Q99ML9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf111Q99ML9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf111Q99ML9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Rnf111Q99ML9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf111Q99ML9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Rnf111Q99ML9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rnf111Q99ML9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rnf111Q99ML9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rnf111Q99ML9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
Rnf111Q99ML9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf111Q99ML9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Rnf111Q99ML9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf111Q99ML9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf111Q99ML9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf111Q99ML9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf111Q99ML9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rnf111Q99ML9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rnf111Q99ML9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rnf111Q99ML9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rnf111Q99ML9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rnf111Q99ML9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.87■■□□□ 1.25
Rnf111Q99ML9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rnf111Q99ML9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Rnf111Q99ML9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rnf111Q99ML9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rnf111Q99ML9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rnf111Q99ML9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Rnf111Q99ML9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.85■■□□□ 1.25
Rnf111Q99ML9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rnf111Q99ML9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Rnf111Q99ML9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Rnf111Q99ML9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf111Q99ML9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf111Q99ML9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf111Q99ML9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf111Q99ML9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.83■■□□□ 1.25
Rnf111Q99ML9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf111Q99ML9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.81■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms