Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdhac2Q91Y09 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdhac2Q91Y09 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
Pcdhac2Q91Y09 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Pcdhac2Q91Y09 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdhac2Q91Y09 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdhac2Q91Y09 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhac2Q91Y09 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhac2Q91Y09 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhac2Q91Y09 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Pcdhac2Q91Y09 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhac2Q91Y09 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhac2Q91Y09 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Pcdhac2Q91Y09 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhac2Q91Y09 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhac2Q91Y09 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
Pcdhac2Q91Y09 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdhac2Q91Y09 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.55■■□□□ 1.84
Pcdhac2Q91Y09 Mir6538-201ENSMUST00000183713 110 ntBASIC26.55■■□□□ 1.84
Pcdhac2Q91Y09 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.55■■□□□ 1.84
Pcdhac2Q91Y09 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhac2Q91Y09 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.54■■□□□ 1.84
Pcdhac2Q91Y09 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhac2Q91Y09 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhac2Q91Y09 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdhac2Q91Y09 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdhac2Q91Y09 Gm6311-201ENSMUST00000073790 878 ntBASIC26.52■■□□□ 1.84
Pcdhac2Q91Y09 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Pcdhac2Q91Y09 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdhac2Q91Y09 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdhac2Q91Y09 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.51■■□□□ 1.83
Pcdhac2Q91Y09 Cap2-205ENSMUST00000225824 1634 ntBASIC26.5■■□□□ 1.83
Pcdhac2Q91Y09 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Pcdhac2Q91Y09 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.5■■□□□ 1.83
Pcdhac2Q91Y09 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.5■■□□□ 1.83
Pcdhac2Q91Y09 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
Pcdhac2Q91Y09 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdhac2Q91Y09 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdhac2Q91Y09 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdhac2Q91Y09 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhac2Q91Y09 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhac2Q91Y09 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
Pcdhac2Q91Y09 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
Pcdhac2Q91Y09 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.47■■□□□ 1.83
Pcdhac2Q91Y09 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhac2Q91Y09 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdhac2Q91Y09 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.46■■□□□ 1.83
Pcdhac2Q91Y09 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdhac2Q91Y09 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdhac2Q91Y09 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdhac2Q91Y09 Particl-201ENSMUST00000205370 1560 ntBASIC26.43■■□□□ 1.82
Pcdhac2Q91Y09 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.43■■□□□ 1.82
Pcdhac2Q91Y09 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdhac2Q91Y09 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Pcdhac2Q91Y09 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pcdhac2Q91Y09 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pcdhac2Q91Y09 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.38■■□□□ 1.81
Pcdhac2Q91Y09 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhac2Q91Y09 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdhac2Q91Y09 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdhac2Q91Y09 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhac2Q91Y09 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhac2Q91Y09 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhac2Q91Y09 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Pcdhac2Q91Y09 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Pcdhac2Q91Y09 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdhac2Q91Y09 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.34■■□□□ 1.81
Pcdhac2Q91Y09 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26.34■■□□□ 1.81
Pcdhac2Q91Y09 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Pcdhac2Q91Y09 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdhac2Q91Y09 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdhac2Q91Y09 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Pcdhac2Q91Y09 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdhac2Q91Y09 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdhac2Q91Y09 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdhac2Q91Y09 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdhac2Q91Y09 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdhac2Q91Y09 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhac2Q91Y09 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.3■■□□□ 1.8
Pcdhac2Q91Y09 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Pcdhac2Q91Y09 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Pcdhac2Q91Y09 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Pcdhac2Q91Y09 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdhac2Q91Y09 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.27■■□□□ 1.8
Pcdhac2Q91Y09 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pcdhac2Q91Y09 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhac2Q91Y09 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
Pcdhac2Q91Y09 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdhac2Q91Y09 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdhac2Q91Y09 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdhac2Q91Y09 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC26.23■■□□□ 1.79
Pcdhac2Q91Y09 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdhac2Q91Y09 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Pcdhac2Q91Y09 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdhac2Q91Y09 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdhac2Q91Y09 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.21■■□□□ 1.79
Pcdhac2Q91Y09 Scarna2-201ENSMUST00000157560 414 ntBASIC26.2■■□□□ 1.78
Pcdhac2Q91Y09 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdhac2Q91Y09 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdhac2Q91Y09 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms