Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Cd109Q8R422 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Cd109Q8R422 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Cd109Q8R422 Pcf11-205ENSMUST00000208255 1720 ntBASIC35.04■■■■□ 3.2
Cd109Q8R422 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
Cd109Q8R422 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Cd109Q8R422 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
Cd109Q8R422 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
Cd109Q8R422 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Cd109Q8R422 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC35.03■■■■□ 3.2
Cd109Q8R422 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Cd109Q8R422 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
Cd109Q8R422 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
Cd109Q8R422 Gm11175-201ENSMUST00000116172 543 ntBASIC35.02■■■■□ 3.2
Cd109Q8R422 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC35.02■■■■□ 3.2
Cd109Q8R422 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC35.02■■■■□ 3.2
Cd109Q8R422 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC35.01■■■■□ 3.2
Cd109Q8R422 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
Cd109Q8R422 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC35■■■■□ 3.19
Cd109Q8R422 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC35■■■■□ 3.19
Cd109Q8R422 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC34.99■■■■□ 3.19
Cd109Q8R422 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Cd109Q8R422 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC34.98■■■■□ 3.19
Cd109Q8R422 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC34.96■■■■□ 3.19
Cd109Q8R422 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC34.95■■■■□ 3.18
Cd109Q8R422 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC34.93■■■■□ 3.18
Cd109Q8R422 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Cd109Q8R422 Particl-201ENSMUST00000205370 1560 ntBASIC34.92■■■■□ 3.18
Cd109Q8R422 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
Cd109Q8R422 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC34.89■■■■□ 3.18
Cd109Q8R422 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC34.89■■■■□ 3.18
Cd109Q8R422 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
Cd109Q8R422 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC34.88■■■■□ 3.17
Cd109Q8R422 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Cd109Q8R422 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC34.87■■■■□ 3.17
Cd109Q8R422 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Cd109Q8R422 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC34.86■■■■□ 3.17
Cd109Q8R422 Mir6538-201ENSMUST00000183713 110 ntBASIC34.86■■■■□ 3.17
Cd109Q8R422 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Cd109Q8R422 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
Cd109Q8R422 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
Cd109Q8R422 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
Cd109Q8R422 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC34.83■■■■□ 3.17
Cd109Q8R422 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Cd109Q8R422 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC34.83■■■■□ 3.17
Cd109Q8R422 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Cd109Q8R422 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
Cd109Q8R422 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Cd109Q8R422 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC34.79■■■■□ 3.16
Cd109Q8R422 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC34.78■■■■□ 3.16
Cd109Q8R422 AC167019.3-201ENSMUST00000228225 1266 ntBASIC34.78■■■■□ 3.16
Cd109Q8R422 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Cd109Q8R422 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Cd109Q8R422 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC34.77■■■■□ 3.16
Cd109Q8R422 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC34.76■■■■□ 3.16
Cd109Q8R422 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Cd109Q8R422 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
Cd109Q8R422 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC34.73■■■■□ 3.15
Cd109Q8R422 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC34.73■■■■□ 3.15
Cd109Q8R422 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Cd109Q8R422 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC34.71■■■■□ 3.15
Cd109Q8R422 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC34.71■■■■□ 3.15
Cd109Q8R422 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
Cd109Q8R422 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
Cd109Q8R422 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC34.69■■■■□ 3.14
Cd109Q8R422 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC34.68■■■■□ 3.14
Cd109Q8R422 Gm6311-201ENSMUST00000073790 878 ntBASIC34.68■■■■□ 3.14
Cd109Q8R422 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Cd109Q8R422 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC34.66■■■■□ 3.14
Cd109Q8R422 AC153504.1-201ENSMUST00000218379 2290 ntBASIC34.65■■■■□ 3.14
Cd109Q8R422 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
Cd109Q8R422 Zxda-201ENSMUST00000117281 2621 ntBASIC34.64■■■■□ 3.14
Cd109Q8R422 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Cd109Q8R422 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
Cd109Q8R422 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC34.63■■■■□ 3.13
Cd109Q8R422 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC34.63■■■■□ 3.13
Cd109Q8R422 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC34.61■■■■□ 3.13
Cd109Q8R422 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Cd109Q8R422 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC34.61■■■■□ 3.13
Cd109Q8R422 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC34.58■■■■□ 3.13
Cd109Q8R422 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
Cd109Q8R422 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Cd109Q8R422 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Cd109Q8R422 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Cd109Q8R422 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
Cd109Q8R422 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
Cd109Q8R422 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
Cd109Q8R422 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC34.53■■■■□ 3.12
Cd109Q8R422 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC34.51■■■■□ 3.12
Cd109Q8R422 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC34.49■■■■□ 3.11
Cd109Q8R422 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Cd109Q8R422 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Cd109Q8R422 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC34.48■■■■□ 3.11
Cd109Q8R422 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Cd109Q8R422 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC34.48■■■■□ 3.11
Cd109Q8R422 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Cd109Q8R422 Gm9905-201ENSMUST00000065740 1845 ntBASIC34.47■■■■□ 3.11
Cd109Q8R422 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC34.47■■■■□ 3.11
Cd109Q8R422 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Cd109Q8R422 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC34.46■■■■□ 3.11
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms