Protein–RNA interactions for Protein: Q8R2D3

Vmn1r4, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r4Q8R2D3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r4Q8R2D3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.24■□□□□ 0.83
Vmn1r4Q8R2D3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r4Q8R2D3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r4Q8R2D3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Vmn1r4Q8R2D3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r4Q8R2D3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r4Q8R2D3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r4Q8R2D3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.21■□□□□ 0.83
Vmn1r4Q8R2D3 Gm24970-201ENSMUST00000175582 82 ntBASIC20.21■□□□□ 0.83
Vmn1r4Q8R2D3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r4Q8R2D3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r4Q8R2D3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.2■□□□□ 0.82
Vmn1r4Q8R2D3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vmn1r4Q8R2D3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Vmn1r4Q8R2D3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vmn1r4Q8R2D3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Vmn1r4Q8R2D3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.17■□□□□ 0.82
Vmn1r4Q8R2D3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vmn1r4Q8R2D3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Vmn1r4Q8R2D3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Vmn1r4Q8R2D3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.17■□□□□ 0.82
Vmn1r4Q8R2D3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vmn1r4Q8R2D3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vmn1r4Q8R2D3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.16■□□□□ 0.82
Vmn1r4Q8R2D3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Vmn1r4Q8R2D3 Gm45855-201ENSMUST00000212546 880 ntBASIC20.16■□□□□ 0.82
Vmn1r4Q8R2D3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vmn1r4Q8R2D3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Vmn1r4Q8R2D3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r4Q8R2D3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r4Q8R2D3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r4Q8R2D3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Vmn1r4Q8R2D3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Vmn1r4Q8R2D3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r4Q8R2D3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.14■□□□□ 0.81
Vmn1r4Q8R2D3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r4Q8R2D3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r4Q8R2D3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r4Q8R2D3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
Vmn1r4Q8R2D3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r4Q8R2D3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r4Q8R2D3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Vmn1r4Q8R2D3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r4Q8R2D3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r4Q8R2D3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.12■□□□□ 0.81
Vmn1r4Q8R2D3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r4Q8R2D3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r4Q8R2D3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r4Q8R2D3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Vmn1r4Q8R2D3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.1■□□□□ 0.81
Vmn1r4Q8R2D3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Vmn1r4Q8R2D3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r4Q8R2D3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r4Q8R2D3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r4Q8R2D3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r4Q8R2D3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r4Q8R2D3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Vmn1r4Q8R2D3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r4Q8R2D3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vmn1r4Q8R2D3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Vmn1r4Q8R2D3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r4Q8R2D3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r4Q8R2D3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r4Q8R2D3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r4Q8R2D3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r4Q8R2D3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r4Q8R2D3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r4Q8R2D3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r4Q8R2D3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Vmn1r4Q8R2D3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Vmn1r4Q8R2D3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r4Q8R2D3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r4Q8R2D3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r4Q8R2D3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r4Q8R2D3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r4Q8R2D3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r4Q8R2D3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Vmn1r4Q8R2D3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vmn1r4Q8R2D3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Vmn1r4Q8R2D3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r4Q8R2D3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r4Q8R2D3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r4Q8R2D3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r4Q8R2D3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Vmn1r4Q8R2D3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r4Q8R2D3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vmn1r4Q8R2D3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vmn1r4Q8R2D3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vmn1r4Q8R2D3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vmn1r4Q8R2D3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vmn1r4Q8R2D3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vmn1r4Q8R2D3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.96■□□□□ 0.79
Vmn1r4Q8R2D3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Vmn1r4Q8R2D3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vmn1r4Q8R2D3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Vmn1r4Q8R2D3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vmn1r4Q8R2D3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Vmn1r4Q8R2D3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Vmn1r4Q8R2D3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms