Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.55■■□□□ 1.2
Clrn1Q8K445 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Clrn1Q8K445 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Clrn1Q8K445 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Clrn1Q8K445 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Clrn1Q8K445 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.54■■□□□ 1.2
Clrn1Q8K445 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.53■■□□□ 1.2
Clrn1Q8K445 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Clrn1Q8K445 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Clrn1Q8K445 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Clrn1Q8K445 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Clrn1Q8K445 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Clrn1Q8K445 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Clrn1Q8K445 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Clrn1Q8K445 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Clrn1Q8K445 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Clrn1Q8K445 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Clrn1Q8K445 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Clrn1Q8K445 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Clrn1Q8K445 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Clrn1Q8K445 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Clrn1Q8K445 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Clrn1Q8K445 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Clrn1Q8K445 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Clrn1Q8K445 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Clrn1Q8K445 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.44■■□□□ 1.18
Clrn1Q8K445 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Clrn1Q8K445 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Clrn1Q8K445 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Clrn1Q8K445 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.42■■□□□ 1.18
Clrn1Q8K445 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Clrn1Q8K445 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Clrn1Q8K445 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.41■■□□□ 1.18
Clrn1Q8K445 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Clrn1Q8K445 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Clrn1Q8K445 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Clrn1Q8K445 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Clrn1Q8K445 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Clrn1Q8K445 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Clrn1Q8K445 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Clrn1Q8K445 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Clrn1Q8K445 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Clrn1Q8K445 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Clrn1Q8K445 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Clrn1Q8K445 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Clrn1Q8K445 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Clrn1Q8K445 Gm30023-201ENSMUST00000197970 889 ntBASIC22.38■■□□□ 1.17
Clrn1Q8K445 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.38■■□□□ 1.17
Clrn1Q8K445 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Clrn1Q8K445 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.38■■□□□ 1.17
Clrn1Q8K445 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Clrn1Q8K445 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Clrn1Q8K445 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.36■■□□□ 1.17
Clrn1Q8K445 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.35■■□□□ 1.17
Clrn1Q8K445 Nkain2-201ENSMUST00000092602 558 ntBASIC22.35■■□□□ 1.17
Clrn1Q8K445 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Clrn1Q8K445 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Clrn1Q8K445 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Clrn1Q8K445 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Clrn1Q8K445 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.32■■□□□ 1.16
Clrn1Q8K445 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Clrn1Q8K445 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Clrn1Q8K445 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Clrn1Q8K445 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
Clrn1Q8K445 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
Clrn1Q8K445 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Clrn1Q8K445 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
Clrn1Q8K445 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Clrn1Q8K445 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Clrn1Q8K445 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
Clrn1Q8K445 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Clrn1Q8K445 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Clrn1Q8K445 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Clrn1Q8K445 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
Clrn1Q8K445 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Clrn1Q8K445 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Clrn1Q8K445 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.28■■□□□ 1.16
Clrn1Q8K445 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.28■■□□□ 1.16
Clrn1Q8K445 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Clrn1Q8K445 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Clrn1Q8K445 Gm6821-201ENSMUST00000107540 542 ntBASIC22.27■■□□□ 1.16
Clrn1Q8K445 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Clrn1Q8K445 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Clrn1Q8K445 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Clrn1Q8K445 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Clrn1Q8K445 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Clrn1Q8K445 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Clrn1Q8K445 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Clrn1Q8K445 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Clrn1Q8K445 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Clrn1Q8K445 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Clrn1Q8K445 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Clrn1Q8K445 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Clrn1Q8K445 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Clrn1Q8K445 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Clrn1Q8K445 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.21■■□□□ 1.15
Clrn1Q8K445 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.2■■□□□ 1.14
Clrn1Q8K445 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Clrn1Q8K445 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Clrn1Q8K445 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 491.7 ms