Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hist3h2bbQ8CGP0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.37■□□□□ 0.53
Hist3h2bbQ8CGP0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hist3h2bbQ8CGP0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hist3h2bbQ8CGP0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Hist3h2bbQ8CGP0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hist3h2bbQ8CGP0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hist3h2bbQ8CGP0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hist3h2bbQ8CGP0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hist3h2bbQ8CGP0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hist3h2bbQ8CGP0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hist3h2bbQ8CGP0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hist3h2bbQ8CGP0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist3h2bbQ8CGP0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist3h2bbQ8CGP0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist3h2bbQ8CGP0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist3h2bbQ8CGP0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hist3h2bbQ8CGP0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hist3h2bbQ8CGP0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Hist3h2bbQ8CGP0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.33■□□□□ 0.52
Hist3h2bbQ8CGP0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Hist3h2bbQ8CGP0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hist3h2bbQ8CGP0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hist3h2bbQ8CGP0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hist3h2bbQ8CGP0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hist3h2bbQ8CGP0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Hist3h2bbQ8CGP0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Hist3h2bbQ8CGP0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hist3h2bbQ8CGP0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hist3h2bbQ8CGP0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hist3h2bbQ8CGP0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hist3h2bbQ8CGP0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hist3h2bbQ8CGP0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Hist3h2bbQ8CGP0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Hist3h2bbQ8CGP0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hist3h2bbQ8CGP0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hist3h2bbQ8CGP0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hist3h2bbQ8CGP0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Hist3h2bbQ8CGP0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hist3h2bbQ8CGP0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hist3h2bbQ8CGP0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hist3h2bbQ8CGP0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Hist3h2bbQ8CGP0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hist3h2bbQ8CGP0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist3h2bbQ8CGP0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hist3h2bbQ8CGP0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Hist3h2bbQ8CGP0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hist3h2bbQ8CGP0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Hist3h2bbQ8CGP0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Hist3h2bbQ8CGP0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist3h2bbQ8CGP0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hist3h2bbQ8CGP0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Hist3h2bbQ8CGP0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.23■□□□□ 0.51
Hist3h2bbQ8CGP0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist3h2bbQ8CGP0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hist3h2bbQ8CGP0 Gm24109-201ENSMUST00000175489 103 ntBASIC18.23■□□□□ 0.51
Hist3h2bbQ8CGP0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist3h2bbQ8CGP0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Hist3h2bbQ8CGP0 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.22■□□□□ 0.51
Hist3h2bbQ8CGP0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hist3h2bbQ8CGP0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hist3h2bbQ8CGP0 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.21■□□□□ 0.5
Hist3h2bbQ8CGP0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Hist3h2bbQ8CGP0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hist3h2bbQ8CGP0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist3h2bbQ8CGP0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Hist3h2bbQ8CGP0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist3h2bbQ8CGP0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist3h2bbQ8CGP0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hist3h2bbQ8CGP0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hist3h2bbQ8CGP0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hist3h2bbQ8CGP0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist3h2bbQ8CGP0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hist3h2bbQ8CGP0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Hist3h2bbQ8CGP0 Notumos-201ENSMUST00000151998 2659 ntBASIC18.17■□□□□ 0.5
Hist3h2bbQ8CGP0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hist3h2bbQ8CGP0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hist3h2bbQ8CGP0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hist3h2bbQ8CGP0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hist3h2bbQ8CGP0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.17■□□□□ 0.5
Hist3h2bbQ8CGP0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Hist3h2bbQ8CGP0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.16■□□□□ 0.5
Hist3h2bbQ8CGP0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hist3h2bbQ8CGP0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hist3h2bbQ8CGP0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Hist3h2bbQ8CGP0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Hist3h2bbQ8CGP0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hist3h2bbQ8CGP0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hist3h2bbQ8CGP0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Hist3h2bbQ8CGP0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Hist3h2bbQ8CGP0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hist3h2bbQ8CGP0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hist3h2bbQ8CGP0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hist3h2bbQ8CGP0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hist3h2bbQ8CGP0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Hist3h2bbQ8CGP0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hist3h2bbQ8CGP0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hist3h2bbQ8CGP0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hist3h2bbQ8CGP0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hist3h2bbQ8CGP0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms