Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Smc2Q8CG48 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Smc2Q8CG48 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.3■■□□□ 1.96
Smc2Q8CG48 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
Smc2Q8CG48 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Smc2Q8CG48 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
Smc2Q8CG48 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
Smc2Q8CG48 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Smc2Q8CG48 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Smc2Q8CG48 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Smc2Q8CG48 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Smc2Q8CG48 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
Smc2Q8CG48 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Smc2Q8CG48 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Smc2Q8CG48 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Smc2Q8CG48 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Smc2Q8CG48 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Smc2Q8CG48 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Smc2Q8CG48 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Smc2Q8CG48 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Smc2Q8CG48 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.18■■□□□ 1.94
Smc2Q8CG48 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Smc2Q8CG48 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
Smc2Q8CG48 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Smc2Q8CG48 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Smc2Q8CG48 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
Smc2Q8CG48 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Smc2Q8CG48 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC27.16■■□□□ 1.94
Smc2Q8CG48 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Smc2Q8CG48 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.15■■□□□ 1.94
Smc2Q8CG48 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Smc2Q8CG48 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Smc2Q8CG48 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Smc2Q8CG48 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Smc2Q8CG48 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Smc2Q8CG48 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC27.12■■□□□ 1.93
Smc2Q8CG48 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
Smc2Q8CG48 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Smc2Q8CG48 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Smc2Q8CG48 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Smc2Q8CG48 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
Smc2Q8CG48 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Smc2Q8CG48 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
Smc2Q8CG48 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Smc2Q8CG48 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Smc2Q8CG48 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Smc2Q8CG48 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
Smc2Q8CG48 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Smc2Q8CG48 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Smc2Q8CG48 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27.06■■□□□ 1.92
Smc2Q8CG48 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
Smc2Q8CG48 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Smc2Q8CG48 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Smc2Q8CG48 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.05■■□□□ 1.92
Smc2Q8CG48 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Smc2Q8CG48 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Smc2Q8CG48 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC27.03■■□□□ 1.92
Smc2Q8CG48 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.03■■□□□ 1.92
Smc2Q8CG48 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.02■■□□□ 1.92
Smc2Q8CG48 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Smc2Q8CG48 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Smc2Q8CG48 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Smc2Q8CG48 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Smc2Q8CG48 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Smc2Q8CG48 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Smc2Q8CG48 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Smc2Q8CG48 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Smc2Q8CG48 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
Smc2Q8CG48 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27■■□□□ 1.91
Smc2Q8CG48 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC27■■□□□ 1.91
Smc2Q8CG48 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Smc2Q8CG48 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Smc2Q8CG48 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Smc2Q8CG48 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
Smc2Q8CG48 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Smc2Q8CG48 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Smc2Q8CG48 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Smc2Q8CG48 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Smc2Q8CG48 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Smc2Q8CG48 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Smc2Q8CG48 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Smc2Q8CG48 Gm30023-201ENSMUST00000197970 889 ntBASIC26.96■■□□□ 1.91
Smc2Q8CG48 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Smc2Q8CG48 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
Smc2Q8CG48 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Smc2Q8CG48 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.93■■□□□ 1.9
Smc2Q8CG48 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
Smc2Q8CG48 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Smc2Q8CG48 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Smc2Q8CG48 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Smc2Q8CG48 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.91■■□□□ 1.9
Smc2Q8CG48 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Smc2Q8CG48 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Smc2Q8CG48 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Smc2Q8CG48 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Smc2Q8CG48 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Smc2Q8CG48 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
Smc2Q8CG48 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Smc2Q8CG48 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
Smc2Q8CG48 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms