Protein–RNA interactions for Protein: Q8C940

A730049H05Rik, RIKEN cDNA A730049H05 gene, mousemouse

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A730049H05RikQ8C940 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.64■■□□□ 1.05
A730049H05RikQ8C940 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
A730049H05RikQ8C940 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
A730049H05RikQ8C940 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
A730049H05RikQ8C940 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
A730049H05RikQ8C940 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
A730049H05RikQ8C940 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.62■■□□□ 1.05
A730049H05RikQ8C940 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
A730049H05RikQ8C940 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
A730049H05RikQ8C940 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
A730049H05RikQ8C940 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
A730049H05RikQ8C940 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
A730049H05RikQ8C940 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
A730049H05RikQ8C940 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
A730049H05RikQ8C940 Zfp131-205ENSMUST00000223812 663 ntBASIC21.6■■□□□ 1.05
A730049H05RikQ8C940 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.58■■□□□ 1.05
A730049H05RikQ8C940 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
A730049H05RikQ8C940 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
A730049H05RikQ8C940 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
A730049H05RikQ8C940 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
A730049H05RikQ8C940 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
A730049H05RikQ8C940 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
A730049H05RikQ8C940 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
A730049H05RikQ8C940 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
A730049H05RikQ8C940 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.56■■□□□ 1.04
A730049H05RikQ8C940 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.55■■□□□ 1.04
A730049H05RikQ8C940 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
A730049H05RikQ8C940 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.54■■□□□ 1.04
A730049H05RikQ8C940 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
A730049H05RikQ8C940 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
A730049H05RikQ8C940 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
A730049H05RikQ8C940 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
A730049H05RikQ8C940 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
A730049H05RikQ8C940 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
A730049H05RikQ8C940 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
A730049H05RikQ8C940 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
A730049H05RikQ8C940 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
A730049H05RikQ8C940 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.52■■□□□ 1.04
A730049H05RikQ8C940 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
A730049H05RikQ8C940 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
A730049H05RikQ8C940 Gm9397-201ENSMUST00000200125 605 ntBASIC21.5■■□□□ 1.03
A730049H05RikQ8C940 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
A730049H05RikQ8C940 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
A730049H05RikQ8C940 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
A730049H05RikQ8C940 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
A730049H05RikQ8C940 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
A730049H05RikQ8C940 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
A730049H05RikQ8C940 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
A730049H05RikQ8C940 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.48■■□□□ 1.03
A730049H05RikQ8C940 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.48■■□□□ 1.03
A730049H05RikQ8C940 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
A730049H05RikQ8C940 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
A730049H05RikQ8C940 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.46■■□□□ 1.03
A730049H05RikQ8C940 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
A730049H05RikQ8C940 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.45■■□□□ 1.02
A730049H05RikQ8C940 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
A730049H05RikQ8C940 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
A730049H05RikQ8C940 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
A730049H05RikQ8C940 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.45■■□□□ 1.02
A730049H05RikQ8C940 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.45■■□□□ 1.02
A730049H05RikQ8C940 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
A730049H05RikQ8C940 Gm24970-201ENSMUST00000175582 82 ntBASIC21.44■■□□□ 1.02
A730049H05RikQ8C940 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.44■■□□□ 1.02
A730049H05RikQ8C940 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
A730049H05RikQ8C940 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
A730049H05RikQ8C940 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
A730049H05RikQ8C940 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
A730049H05RikQ8C940 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
A730049H05RikQ8C940 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.41■■□□□ 1.02
A730049H05RikQ8C940 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
A730049H05RikQ8C940 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
A730049H05RikQ8C940 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
A730049H05RikQ8C940 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
A730049H05RikQ8C940 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.37■■□□□ 1.01
A730049H05RikQ8C940 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
A730049H05RikQ8C940 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.35■■□□□ 1.01
A730049H05RikQ8C940 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A730049H05RikQ8C940 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A730049H05RikQ8C940 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.35■■□□□ 1.01
A730049H05RikQ8C940 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
A730049H05RikQ8C940 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
A730049H05RikQ8C940 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
A730049H05RikQ8C940 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
A730049H05RikQ8C940 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.33■■□□□ 1.01
A730049H05RikQ8C940 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
A730049H05RikQ8C940 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
A730049H05RikQ8C940 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
A730049H05RikQ8C940 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.32■■□□□ 1
A730049H05RikQ8C940 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.32■■□□□ 1
A730049H05RikQ8C940 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
A730049H05RikQ8C940 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
A730049H05RikQ8C940 Gm45855-201ENSMUST00000212546 880 ntBASIC21.31■■□□□ 1
A730049H05RikQ8C940 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
A730049H05RikQ8C940 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
A730049H05RikQ8C940 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
A730049H05RikQ8C940 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.3■■□□□ 1
A730049H05RikQ8C940 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
A730049H05RikQ8C940 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
A730049H05RikQ8C940 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
A730049H05RikQ8C940 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms