Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Tsen54Q8C2A2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tsen54Q8C2A2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tsen54Q8C2A2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Tsen54Q8C2A2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tsen54Q8C2A2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tsen54Q8C2A2 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.69■□□□□ 0.74
Tsen54Q8C2A2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tsen54Q8C2A2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tsen54Q8C2A2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tsen54Q8C2A2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Tsen54Q8C2A2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tsen54Q8C2A2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tsen54Q8C2A2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tsen54Q8C2A2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tsen54Q8C2A2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.67■□□□□ 0.74
Tsen54Q8C2A2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Tsen54Q8C2A2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tsen54Q8C2A2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tsen54Q8C2A2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Tsen54Q8C2A2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tsen54Q8C2A2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.66■□□□□ 0.74
Tsen54Q8C2A2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tsen54Q8C2A2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tsen54Q8C2A2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Tsen54Q8C2A2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tsen54Q8C2A2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tsen54Q8C2A2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Tsen54Q8C2A2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tsen54Q8C2A2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tsen54Q8C2A2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Tsen54Q8C2A2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Tsen54Q8C2A2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tsen54Q8C2A2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tsen54Q8C2A2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tsen54Q8C2A2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Tsen54Q8C2A2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Tsen54Q8C2A2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tsen54Q8C2A2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tsen54Q8C2A2 Zfp131-205ENSMUST00000223812 663 ntBASIC19.62■□□□□ 0.73
Tsen54Q8C2A2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tsen54Q8C2A2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.62■□□□□ 0.73
Tsen54Q8C2A2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tsen54Q8C2A2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.62■□□□□ 0.73
Tsen54Q8C2A2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.61■□□□□ 0.73
Tsen54Q8C2A2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tsen54Q8C2A2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Tsen54Q8C2A2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tsen54Q8C2A2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tsen54Q8C2A2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tsen54Q8C2A2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tsen54Q8C2A2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.6■□□□□ 0.73
Tsen54Q8C2A2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.6■□□□□ 0.73
Tsen54Q8C2A2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tsen54Q8C2A2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tsen54Q8C2A2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tsen54Q8C2A2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tsen54Q8C2A2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tsen54Q8C2A2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.59■□□□□ 0.73
Tsen54Q8C2A2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tsen54Q8C2A2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.58■□□□□ 0.72
Tsen54Q8C2A2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tsen54Q8C2A2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.57■□□□□ 0.72
Tsen54Q8C2A2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Tsen54Q8C2A2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Tsen54Q8C2A2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Tsen54Q8C2A2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tsen54Q8C2A2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tsen54Q8C2A2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tsen54Q8C2A2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tsen54Q8C2A2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
Tsen54Q8C2A2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Tsen54Q8C2A2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.55■□□□□ 0.72
Tsen54Q8C2A2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tsen54Q8C2A2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tsen54Q8C2A2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tsen54Q8C2A2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tsen54Q8C2A2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tsen54Q8C2A2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tsen54Q8C2A2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tsen54Q8C2A2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tsen54Q8C2A2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tsen54Q8C2A2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tsen54Q8C2A2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tsen54Q8C2A2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tsen54Q8C2A2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tsen54Q8C2A2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tsen54Q8C2A2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tsen54Q8C2A2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.51■□□□□ 0.71
Tsen54Q8C2A2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tsen54Q8C2A2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tsen54Q8C2A2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tsen54Q8C2A2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tsen54Q8C2A2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tsen54Q8C2A2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tsen54Q8C2A2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tsen54Q8C2A2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.5■□□□□ 0.71
Tsen54Q8C2A2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Tsen54Q8C2A2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tsen54Q8C2A2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms