Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdkl3Q8BLF2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
Cdkl3Q8BLF2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdkl3Q8BLF2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cdkl3Q8BLF2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdkl3Q8BLF2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdkl3Q8BLF2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdkl3Q8BLF2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Cdkl3Q8BLF2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cdkl3Q8BLF2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cdkl3Q8BLF2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdkl3Q8BLF2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cdkl3Q8BLF2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdkl3Q8BLF2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.43■□□□□ 0.86
Cdkl3Q8BLF2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.43■□□□□ 0.86
Cdkl3Q8BLF2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdkl3Q8BLF2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdkl3Q8BLF2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdkl3Q8BLF2 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.42■□□□□ 0.86
Cdkl3Q8BLF2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdkl3Q8BLF2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdkl3Q8BLF2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cdkl3Q8BLF2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Cdkl3Q8BLF2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Cdkl3Q8BLF2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdkl3Q8BLF2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
Cdkl3Q8BLF2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdkl3Q8BLF2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdkl3Q8BLF2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdkl3Q8BLF2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdkl3Q8BLF2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.39■□□□□ 0.85
Cdkl3Q8BLF2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.39■□□□□ 0.85
Cdkl3Q8BLF2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.38■□□□□ 0.85
Cdkl3Q8BLF2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.38■□□□□ 0.85
Cdkl3Q8BLF2 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.38■□□□□ 0.85
Cdkl3Q8BLF2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cdkl3Q8BLF2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdkl3Q8BLF2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkl3Q8BLF2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkl3Q8BLF2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdkl3Q8BLF2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdkl3Q8BLF2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Cdkl3Q8BLF2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdkl3Q8BLF2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdkl3Q8BLF2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cdkl3Q8BLF2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdkl3Q8BLF2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdkl3Q8BLF2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.34■□□□□ 0.85
Cdkl3Q8BLF2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.33■□□□□ 0.85
Cdkl3Q8BLF2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdkl3Q8BLF2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdkl3Q8BLF2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.32■□□□□ 0.84
Cdkl3Q8BLF2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdkl3Q8BLF2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdkl3Q8BLF2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
Cdkl3Q8BLF2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdkl3Q8BLF2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdkl3Q8BLF2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdkl3Q8BLF2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cdkl3Q8BLF2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdkl3Q8BLF2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.3■□□□□ 0.84
Cdkl3Q8BLF2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdkl3Q8BLF2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdkl3Q8BLF2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdkl3Q8BLF2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Cdkl3Q8BLF2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.28■□□□□ 0.84
Cdkl3Q8BLF2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdkl3Q8BLF2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdkl3Q8BLF2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdkl3Q8BLF2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Cdkl3Q8BLF2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdkl3Q8BLF2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdkl3Q8BLF2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdkl3Q8BLF2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkl3Q8BLF2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Cdkl3Q8BLF2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkl3Q8BLF2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkl3Q8BLF2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Cdkl3Q8BLF2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdkl3Q8BLF2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.25■□□□□ 0.83
Cdkl3Q8BLF2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdkl3Q8BLF2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cdkl3Q8BLF2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cdkl3Q8BLF2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdkl3Q8BLF2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdkl3Q8BLF2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdkl3Q8BLF2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdkl3Q8BLF2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cdkl3Q8BLF2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cdkl3Q8BLF2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Cdkl3Q8BLF2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdkl3Q8BLF2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdkl3Q8BLF2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.22■□□□□ 0.83
Cdkl3Q8BLF2 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.21■□□□□ 0.83
Cdkl3Q8BLF2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cdkl3Q8BLF2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdkl3Q8BLF2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdkl3Q8BLF2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdkl3Q8BLF2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cdkl3Q8BLF2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms