Protein–RNA interactions for Protein: Q8BKD6

Rnf144b, E3 ubiquitin-protein ligase RNF144B, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf144bQ8BKD6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf144bQ8BKD6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf144bQ8BKD6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.38■□□□□ 0.85
Rnf144bQ8BKD6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf144bQ8BKD6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf144bQ8BKD6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf144bQ8BKD6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Rnf144bQ8BKD6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf144bQ8BKD6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf144bQ8BKD6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rnf144bQ8BKD6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Rnf144bQ8BKD6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf144bQ8BKD6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.36■□□□□ 0.85
Rnf144bQ8BKD6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf144bQ8BKD6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf144bQ8BKD6 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.35■□□□□ 0.85
Rnf144bQ8BKD6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf144bQ8BKD6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf144bQ8BKD6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf144bQ8BKD6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf144bQ8BKD6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.32■□□□□ 0.84
Rnf144bQ8BKD6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Rnf144bQ8BKD6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf144bQ8BKD6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rnf144bQ8BKD6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf144bQ8BKD6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf144bQ8BKD6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Rnf144bQ8BKD6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.31■□□□□ 0.84
Rnf144bQ8BKD6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Rnf144bQ8BKD6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf144bQ8BKD6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf144bQ8BKD6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf144bQ8BKD6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf144bQ8BKD6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf144bQ8BKD6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf144bQ8BKD6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Rnf144bQ8BKD6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.28■□□□□ 0.84
Rnf144bQ8BKD6 Gm24970-201ENSMUST00000175582 82 ntBASIC20.28■□□□□ 0.84
Rnf144bQ8BKD6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf144bQ8BKD6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf144bQ8BKD6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.27■□□□□ 0.84
Rnf144bQ8BKD6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.27■□□□□ 0.84
Rnf144bQ8BKD6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf144bQ8BKD6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf144bQ8BKD6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rnf144bQ8BKD6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Rnf144bQ8BKD6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.25■□□□□ 0.83
Rnf144bQ8BKD6 Gm45855-201ENSMUST00000212546 880 ntBASIC20.25■□□□□ 0.83
Rnf144bQ8BKD6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.25■□□□□ 0.83
Rnf144bQ8BKD6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rnf144bQ8BKD6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf144bQ8BKD6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf144bQ8BKD6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf144bQ8BKD6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.23■□□□□ 0.83
Rnf144bQ8BKD6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf144bQ8BKD6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf144bQ8BKD6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf144bQ8BKD6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf144bQ8BKD6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.22■□□□□ 0.83
Rnf144bQ8BKD6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf144bQ8BKD6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf144bQ8BKD6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf144bQ8BKD6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf144bQ8BKD6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf144bQ8BKD6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf144bQ8BKD6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.2■□□□□ 0.82
Rnf144bQ8BKD6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf144bQ8BKD6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf144bQ8BKD6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf144bQ8BKD6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf144bQ8BKD6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Rnf144bQ8BKD6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf144bQ8BKD6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf144bQ8BKD6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf144bQ8BKD6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf144bQ8BKD6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf144bQ8BKD6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Rnf144bQ8BKD6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Rnf144bQ8BKD6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf144bQ8BKD6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Rnf144bQ8BKD6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Rnf144bQ8BKD6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf144bQ8BKD6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf144bQ8BKD6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rnf144bQ8BKD6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf144bQ8BKD6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf144bQ8BKD6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Rnf144bQ8BKD6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf144bQ8BKD6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf144bQ8BKD6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf144bQ8BKD6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf144bQ8BKD6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf144bQ8BKD6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Rnf144bQ8BKD6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf144bQ8BKD6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf144bQ8BKD6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf144bQ8BKD6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf144bQ8BKD6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf144bQ8BKD6 Gm30023-201ENSMUST00000197970 889 ntBASIC20.09■□□□□ 0.81
Rnf144bQ8BKD6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms