Protein–RNA interactions for Protein: Q80ZS5

Cldn34b3, Claudin 34B3, mousemouse

Predictions only

Length 209 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34b3Q80ZS5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cldn34b3Q80ZS5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cldn34b3Q80ZS5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cldn34b3Q80ZS5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cldn34b3Q80ZS5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.28■■□□□ 1.16
Cldn34b3Q80ZS5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cldn34b3Q80ZS5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cldn34b3Q80ZS5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Cldn34b3Q80ZS5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cldn34b3Q80ZS5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.26■■□□□ 1.15
Cldn34b3Q80ZS5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cldn34b3Q80ZS5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cldn34b3Q80ZS5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cldn34b3Q80ZS5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Cldn34b3Q80ZS5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cldn34b3Q80ZS5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Cldn34b3Q80ZS5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cldn34b3Q80ZS5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Cldn34b3Q80ZS5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cldn34b3Q80ZS5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cldn34b3Q80ZS5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Cldn34b3Q80ZS5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cldn34b3Q80ZS5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cldn34b3Q80ZS5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cldn34b3Q80ZS5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.22■■□□□ 1.15
Cldn34b3Q80ZS5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.21■■□□□ 1.15
Cldn34b3Q80ZS5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Cldn34b3Q80ZS5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cldn34b3Q80ZS5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cldn34b3Q80ZS5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cldn34b3Q80ZS5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
Cldn34b3Q80ZS5 Gm30023-201ENSMUST00000197970 889 ntBASIC22.19■■□□□ 1.14
Cldn34b3Q80ZS5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
Cldn34b3Q80ZS5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cldn34b3Q80ZS5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.18■■□□□ 1.14
Cldn34b3Q80ZS5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cldn34b3Q80ZS5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cldn34b3Q80ZS5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.17■■□□□ 1.14
Cldn34b3Q80ZS5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cldn34b3Q80ZS5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cldn34b3Q80ZS5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.17■■□□□ 1.14
Cldn34b3Q80ZS5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cldn34b3Q80ZS5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Cldn34b3Q80ZS5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
Cldn34b3Q80ZS5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cldn34b3Q80ZS5 Nkain2-201ENSMUST00000092602 558 ntBASIC22.15■■□□□ 1.14
Cldn34b3Q80ZS5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cldn34b3Q80ZS5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Cldn34b3Q80ZS5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cldn34b3Q80ZS5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cldn34b3Q80ZS5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cldn34b3Q80ZS5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cldn34b3Q80ZS5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cldn34b3Q80ZS5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Cldn34b3Q80ZS5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Cldn34b3Q80ZS5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
Cldn34b3Q80ZS5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Cldn34b3Q80ZS5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Cldn34b3Q80ZS5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cldn34b3Q80ZS5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
Cldn34b3Q80ZS5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cldn34b3Q80ZS5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.11■■□□□ 1.13
Cldn34b3Q80ZS5 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.11■■□□□ 1.13
Cldn34b3Q80ZS5 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.11■■□□□ 1.13
Cldn34b3Q80ZS5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cldn34b3Q80ZS5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cldn34b3Q80ZS5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cldn34b3Q80ZS5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Cldn34b3Q80ZS5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Cldn34b3Q80ZS5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Cldn34b3Q80ZS5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Cldn34b3Q80ZS5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Cldn34b3Q80ZS5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Cldn34b3Q80ZS5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cldn34b3Q80ZS5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cldn34b3Q80ZS5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Cldn34b3Q80ZS5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.06■■□□□ 1.12
Cldn34b3Q80ZS5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.06■■□□□ 1.12
Cldn34b3Q80ZS5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cldn34b3Q80ZS5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cldn34b3Q80ZS5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cldn34b3Q80ZS5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cldn34b3Q80ZS5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cldn34b3Q80ZS5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cldn34b3Q80ZS5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Cldn34b3Q80ZS5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.03■■□□□ 1.12
Cldn34b3Q80ZS5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cldn34b3Q80ZS5 Gm6821-201ENSMUST00000107540 542 ntBASIC22.02■■□□□ 1.12
Cldn34b3Q80ZS5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cldn34b3Q80ZS5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22■■□□□ 1.11
Cldn34b3Q80ZS5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cldn34b3Q80ZS5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Cldn34b3Q80ZS5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.98■■□□□ 1.11
Cldn34b3Q80ZS5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cldn34b3Q80ZS5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cldn34b3Q80ZS5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cldn34b3Q80ZS5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cldn34b3Q80ZS5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cldn34b3Q80ZS5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cldn34b3Q80ZS5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms