Protein–RNA interactions for Protein: Q6XAS4

Ssxb3, SSXB3 protein, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxb3Q6XAS4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.68■■□□□ 1.38
Ssxb3Q6XAS4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.68■■□□□ 1.38
Ssxb3Q6XAS4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Ssxb3Q6XAS4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ssxb3Q6XAS4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ssxb3Q6XAS4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ssxb3Q6XAS4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Ssxb3Q6XAS4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Ssxb3Q6XAS4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.65■■□□□ 1.38
Ssxb3Q6XAS4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.65■■□□□ 1.38
Ssxb3Q6XAS4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.65■■□□□ 1.38
Ssxb3Q6XAS4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ssxb3Q6XAS4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ssxb3Q6XAS4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Ssxb3Q6XAS4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Ssxb3Q6XAS4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ssxb3Q6XAS4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ssxb3Q6XAS4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ssxb3Q6XAS4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ssxb3Q6XAS4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ssxb3Q6XAS4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Ssxb3Q6XAS4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ssxb3Q6XAS4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.62■■□□□ 1.37
Ssxb3Q6XAS4 Gm45855-201ENSMUST00000212546 880 ntBASIC23.62■■□□□ 1.37
Ssxb3Q6XAS4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Ssxb3Q6XAS4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ssxb3Q6XAS4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ssxb3Q6XAS4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ssxb3Q6XAS4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.6■■□□□ 1.37
Ssxb3Q6XAS4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ssxb3Q6XAS4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ssxb3Q6XAS4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.59■■□□□ 1.37
Ssxb3Q6XAS4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Ssxb3Q6XAS4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.37
Ssxb3Q6XAS4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
Ssxb3Q6XAS4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ssxb3Q6XAS4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ssxb3Q6XAS4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.57■■□□□ 1.36
Ssxb3Q6XAS4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ssxb3Q6XAS4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
Ssxb3Q6XAS4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ssxb3Q6XAS4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.56■■□□□ 1.36
Ssxb3Q6XAS4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ssxb3Q6XAS4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ssxb3Q6XAS4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ssxb3Q6XAS4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ssxb3Q6XAS4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Ssxb3Q6XAS4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ssxb3Q6XAS4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ssxb3Q6XAS4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ssxb3Q6XAS4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ssxb3Q6XAS4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ssxb3Q6XAS4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ssxb3Q6XAS4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ssxb3Q6XAS4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ssxb3Q6XAS4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ssxb3Q6XAS4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
Ssxb3Q6XAS4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ssxb3Q6XAS4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ssxb3Q6XAS4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ssxb3Q6XAS4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ssxb3Q6XAS4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Ssxb3Q6XAS4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ssxb3Q6XAS4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
Ssxb3Q6XAS4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ssxb3Q6XAS4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ssxb3Q6XAS4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.47■■□□□ 1.35
Ssxb3Q6XAS4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ssxb3Q6XAS4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ssxb3Q6XAS4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.44■■□□□ 1.34
Ssxb3Q6XAS4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Ssxb3Q6XAS4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ssxb3Q6XAS4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ssxb3Q6XAS4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ssxb3Q6XAS4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ssxb3Q6XAS4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Ssxb3Q6XAS4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.41■■□□□ 1.34
Ssxb3Q6XAS4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Ssxb3Q6XAS4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ssxb3Q6XAS4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.4■■□□□ 1.34
Ssxb3Q6XAS4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ssxb3Q6XAS4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Ssxb3Q6XAS4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ssxb3Q6XAS4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ssxb3Q6XAS4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ssxb3Q6XAS4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
Ssxb3Q6XAS4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ssxb3Q6XAS4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.38■■□□□ 1.33
Ssxb3Q6XAS4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Ssxb3Q6XAS4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ssxb3Q6XAS4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ssxb3Q6XAS4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ssxb3Q6XAS4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ssxb3Q6XAS4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ssxb3Q6XAS4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ssxb3Q6XAS4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ssxb3Q6XAS4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.36■■□□□ 1.33
Ssxb3Q6XAS4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.36■■□□□ 1.33
Ssxb3Q6XAS4 Gm30023-201ENSMUST00000197970 889 ntBASIC23.36■■□□□ 1.33
Ssxb3Q6XAS4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms