Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Slc46a1Q6PEM8 Gm11599-201ENSMUST00000118720 878 ntBASIC21.01■□□□□ 0.95
Slc46a1Q6PEM8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21■□□□□ 0.95
Slc46a1Q6PEM8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc46a1Q6PEM8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21■□□□□ 0.95
Slc46a1Q6PEM8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.99■□□□□ 0.95
Slc46a1Q6PEM8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.99■□□□□ 0.95
Slc46a1Q6PEM8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.98■□□□□ 0.95
Slc46a1Q6PEM8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.98■□□□□ 0.95
Slc46a1Q6PEM8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc46a1Q6PEM8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc46a1Q6PEM8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc46a1Q6PEM8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.98■□□□□ 0.95
Slc46a1Q6PEM8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Slc46a1Q6PEM8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Slc46a1Q6PEM8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Slc46a1Q6PEM8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc46a1Q6PEM8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.96■□□□□ 0.95
Slc46a1Q6PEM8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.96■□□□□ 0.95
Slc46a1Q6PEM8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc46a1Q6PEM8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc46a1Q6PEM8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc46a1Q6PEM8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.95
Slc46a1Q6PEM8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Slc46a1Q6PEM8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Slc46a1Q6PEM8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.95■□□□□ 0.94
Slc46a1Q6PEM8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.94■□□□□ 0.94
Slc46a1Q6PEM8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Slc46a1Q6PEM8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.94■□□□□ 0.94
Slc46a1Q6PEM8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Slc46a1Q6PEM8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
Slc46a1Q6PEM8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc46a1Q6PEM8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc46a1Q6PEM8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc46a1Q6PEM8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Slc46a1Q6PEM8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Slc46a1Q6PEM8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc46a1Q6PEM8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc46a1Q6PEM8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc46a1Q6PEM8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc46a1Q6PEM8 Gm30023-201ENSMUST00000197970 889 ntBASIC20.91■□□□□ 0.94
Slc46a1Q6PEM8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.91■□□□□ 0.94
Slc46a1Q6PEM8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc46a1Q6PEM8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Slc46a1Q6PEM8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc46a1Q6PEM8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc46a1Q6PEM8 Amer2-203ENSMUST00000225247 2662 ntBASIC20.9■□□□□ 0.94
Slc46a1Q6PEM8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc46a1Q6PEM8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc46a1Q6PEM8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc46a1Q6PEM8 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.87■□□□□ 0.93
Slc46a1Q6PEM8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Slc46a1Q6PEM8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.87■□□□□ 0.93
Slc46a1Q6PEM8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Slc46a1Q6PEM8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc46a1Q6PEM8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc46a1Q6PEM8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Slc46a1Q6PEM8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc46a1Q6PEM8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc46a1Q6PEM8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Slc46a1Q6PEM8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc46a1Q6PEM8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Slc46a1Q6PEM8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.82■□□□□ 0.92
Slc46a1Q6PEM8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc46a1Q6PEM8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc46a1Q6PEM8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc46a1Q6PEM8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Slc46a1Q6PEM8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Slc46a1Q6PEM8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Slc46a1Q6PEM8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc46a1Q6PEM8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc46a1Q6PEM8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slc46a1Q6PEM8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc46a1Q6PEM8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc46a1Q6PEM8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.79■□□□□ 0.92
Slc46a1Q6PEM8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.79■□□□□ 0.92
Slc46a1Q6PEM8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc46a1Q6PEM8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc46a1Q6PEM8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Slc46a1Q6PEM8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc46a1Q6PEM8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc46a1Q6PEM8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.77■□□□□ 0.92
Slc46a1Q6PEM8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.76■□□□□ 0.91
Slc46a1Q6PEM8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc46a1Q6PEM8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.76■□□□□ 0.91
Slc46a1Q6PEM8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc46a1Q6PEM8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc46a1Q6PEM8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc46a1Q6PEM8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc46a1Q6PEM8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Slc46a1Q6PEM8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc46a1Q6PEM8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Slc46a1Q6PEM8 Particl-201ENSMUST00000205370 1560 ntBASIC20.74■□□□□ 0.91
Slc46a1Q6PEM8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc46a1Q6PEM8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc46a1Q6PEM8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.72■□□□□ 0.91
Slc46a1Q6PEM8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc46a1Q6PEM8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc46a1Q6PEM8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Slc46a1Q6PEM8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms