Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Kdm3aQ6PCM1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC29.39■■■□□ 2.3
Kdm3aQ6PCM1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Kdm3aQ6PCM1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Kdm3aQ6PCM1 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.38■■■□□ 2.29
Kdm3aQ6PCM1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC29.37■■■□□ 2.29
Kdm3aQ6PCM1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
Kdm3aQ6PCM1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC29.36■■■□□ 2.29
Kdm3aQ6PCM1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29.36■■■□□ 2.29
Kdm3aQ6PCM1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Kdm3aQ6PCM1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Kdm3aQ6PCM1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
Kdm3aQ6PCM1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Kdm3aQ6PCM1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.34■■■□□ 2.29
Kdm3aQ6PCM1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Kdm3aQ6PCM1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Kdm3aQ6PCM1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Kdm3aQ6PCM1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Kdm3aQ6PCM1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Kdm3aQ6PCM1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Kdm3aQ6PCM1 Gm7432-201ENSMUST00000210343 879 ntBASIC29.31■■■□□ 2.28
Kdm3aQ6PCM1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Kdm3aQ6PCM1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC29.31■■■□□ 2.28
Kdm3aQ6PCM1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC29.3■■■□□ 2.28
Kdm3aQ6PCM1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Kdm3aQ6PCM1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Kdm3aQ6PCM1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Kdm3aQ6PCM1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Kdm3aQ6PCM1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29.27■■■□□ 2.28
Kdm3aQ6PCM1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Kdm3aQ6PCM1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29.26■■■□□ 2.27
Kdm3aQ6PCM1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Kdm3aQ6PCM1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Kdm3aQ6PCM1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC29.26■■■□□ 2.27
Kdm3aQ6PCM1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
Kdm3aQ6PCM1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Kdm3aQ6PCM1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Kdm3aQ6PCM1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC29.24■■■□□ 2.27
Kdm3aQ6PCM1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Kdm3aQ6PCM1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Kdm3aQ6PCM1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Kdm3aQ6PCM1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Kdm3aQ6PCM1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Kdm3aQ6PCM1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.27
Kdm3aQ6PCM1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Kdm3aQ6PCM1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC29.2■■■□□ 2.26
Kdm3aQ6PCM1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
Kdm3aQ6PCM1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC29.18■■■□□ 2.26
Kdm3aQ6PCM1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Kdm3aQ6PCM1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
Kdm3aQ6PCM1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Kdm3aQ6PCM1 Gm5987-201ENSMUST00000196433 1151 ntBASIC29.16■■■□□ 2.26
Kdm3aQ6PCM1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC29.15■■■□□ 2.26
Kdm3aQ6PCM1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Kdm3aQ6PCM1 Gm11599-201ENSMUST00000118720 878 ntBASIC29.15■■■□□ 2.26
Kdm3aQ6PCM1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC29.15■■■□□ 2.26
Kdm3aQ6PCM1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC29.15■■■□□ 2.26
Kdm3aQ6PCM1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Kdm3aQ6PCM1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29.14■■■□□ 2.25
Kdm3aQ6PCM1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.25
Kdm3aQ6PCM1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
Kdm3aQ6PCM1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
Kdm3aQ6PCM1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Kdm3aQ6PCM1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Kdm3aQ6PCM1 Particl-201ENSMUST00000205370 1560 ntBASIC29.1■■■□□ 2.25
Kdm3aQ6PCM1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC29.1■■■□□ 2.25
Kdm3aQ6PCM1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Kdm3aQ6PCM1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Kdm3aQ6PCM1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC29.08■■■□□ 2.25
Kdm3aQ6PCM1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
Kdm3aQ6PCM1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Kdm3aQ6PCM1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Kdm3aQ6PCM1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Kdm3aQ6PCM1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Kdm3aQ6PCM1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC29.04■■■□□ 2.24
Kdm3aQ6PCM1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Kdm3aQ6PCM1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
Kdm3aQ6PCM1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
Kdm3aQ6PCM1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.24
Kdm3aQ6PCM1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC29.01■■■□□ 2.23
Kdm3aQ6PCM1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Kdm3aQ6PCM1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC29■■■□□ 2.23
Kdm3aQ6PCM1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC29■■■□□ 2.23
Kdm3aQ6PCM1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Kdm3aQ6PCM1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Kdm3aQ6PCM1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.99■■■□□ 2.23
Kdm3aQ6PCM1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.99■■■□□ 2.23
Kdm3aQ6PCM1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Kdm3aQ6PCM1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Kdm3aQ6PCM1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Kdm3aQ6PCM1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Kdm3aQ6PCM1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Kdm3aQ6PCM1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.23
Kdm3aQ6PCM1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC28.95■■■□□ 2.23
Kdm3aQ6PCM1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.95■■■□□ 2.23
Kdm3aQ6PCM1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Kdm3aQ6PCM1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.22
Kdm3aQ6PCM1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28.95■■■□□ 2.22
Kdm3aQ6PCM1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.94■■■□□ 2.22
Kdm3aQ6PCM1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC28.93■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms