Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tgfbr1Q64729 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tgfbr1Q64729 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tgfbr1Q64729 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.34■□□□□ 0.69
Tgfbr1Q64729 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Tgfbr1Q64729 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tgfbr1Q64729 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.33■□□□□ 0.69
Tgfbr1Q64729 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tgfbr1Q64729 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tgfbr1Q64729 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.32■□□□□ 0.68
Tgfbr1Q64729 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tgfbr1Q64729 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tgfbr1Q64729 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tgfbr1Q64729 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tgfbr1Q64729 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tgfbr1Q64729 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.31■□□□□ 0.68
Tgfbr1Q64729 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Tgfbr1Q64729 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tgfbr1Q64729 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tgfbr1Q64729 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Tgfbr1Q64729 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfbr1Q64729 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfbr1Q64729 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tgfbr1Q64729 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tgfbr1Q64729 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.27■□□□□ 0.68
Tgfbr1Q64729 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tgfbr1Q64729 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tgfbr1Q64729 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tgfbr1Q64729 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.27■□□□□ 0.67
Tgfbr1Q64729 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Tgfbr1Q64729 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tgfbr1Q64729 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tgfbr1Q64729 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tgfbr1Q64729 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tgfbr1Q64729 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.25■□□□□ 0.67
Tgfbr1Q64729 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tgfbr1Q64729 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Tgfbr1Q64729 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tgfbr1Q64729 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tgfbr1Q64729 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tgfbr1Q64729 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tgfbr1Q64729 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Tgfbr1Q64729 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tgfbr1Q64729 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tgfbr1Q64729 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tgfbr1Q64729 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tgfbr1Q64729 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tgfbr1Q64729 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.22■□□□□ 0.67
Tgfbr1Q64729 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfbr1Q64729 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfbr1Q64729 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Tgfbr1Q64729 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfbr1Q64729 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfbr1Q64729 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfbr1Q64729 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.2■□□□□ 0.66
Tgfbr1Q64729 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tgfbr1Q64729 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tgfbr1Q64729 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tgfbr1Q64729 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tgfbr1Q64729 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tgfbr1Q64729 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tgfbr1Q64729 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tgfbr1Q64729 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tgfbr1Q64729 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tgfbr1Q64729 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tgfbr1Q64729 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.15■□□□□ 0.66
Tgfbr1Q64729 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tgfbr1Q64729 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Tgfbr1Q64729 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Tgfbr1Q64729 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Tgfbr1Q64729 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Tgfbr1Q64729 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tgfbr1Q64729 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tgfbr1Q64729 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tgfbr1Q64729 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Tgfbr1Q64729 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tgfbr1Q64729 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Tgfbr1Q64729 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tgfbr1Q64729 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tgfbr1Q64729 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tgfbr1Q64729 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tgfbr1Q64729 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tgfbr1Q64729 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.11■□□□□ 0.65
Tgfbr1Q64729 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tgfbr1Q64729 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Tgfbr1Q64729 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tgfbr1Q64729 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tgfbr1Q64729 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tgfbr1Q64729 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tgfbr1Q64729 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tgfbr1Q64729 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Tgfbr1Q64729 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.09■□□□□ 0.65
Tgfbr1Q64729 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Tgfbr1Q64729 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tgfbr1Q64729 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tgfbr1Q64729 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tgfbr1Q64729 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tgfbr1Q64729 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tgfbr1Q64729 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Tgfbr1Q64729 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms