Protein–RNA interactions for Protein: Q62521

Zic3, Zinc finger protein ZIC 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic3Q62521 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zic3Q62521 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zic3Q62521 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zic3Q62521 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Zic3Q62521 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zic3Q62521 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Zic3Q62521 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Zic3Q62521 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Zic3Q62521 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Zic3Q62521 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Zic3Q62521 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Zic3Q62521 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Zic3Q62521 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Zic3Q62521 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Zic3Q62521 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.07■□□□□ 0.8
Zic3Q62521 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Zic3Q62521 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.06■□□□□ 0.8
Zic3Q62521 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.06■□□□□ 0.8
Zic3Q62521 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Zic3Q62521 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Zic3Q62521 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Zic3Q62521 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Zic3Q62521 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Zic3Q62521 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Zic3Q62521 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Zic3Q62521 Gm30023-201ENSMUST00000197970 889 ntBASIC20.03■□□□□ 0.8
Zic3Q62521 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Zic3Q62521 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Zic3Q62521 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Zic3Q62521 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zic3Q62521 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zic3Q62521 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zic3Q62521 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zic3Q62521 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zic3Q62521 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Zic3Q62521 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Zic3Q62521 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20■□□□□ 0.79
Zic3Q62521 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20■□□□□ 0.79
Zic3Q62521 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.99■□□□□ 0.79
Zic3Q62521 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Zic3Q62521 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.99■□□□□ 0.79
Zic3Q62521 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Zic3Q62521 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Zic3Q62521 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Zic3Q62521 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Zic3Q62521 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.99■□□□□ 0.79
Zic3Q62521 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Zic3Q62521 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Zic3Q62521 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.97■□□□□ 0.79
Zic3Q62521 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Zic3Q62521 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Zic3Q62521 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Zic3Q62521 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
Zic3Q62521 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Zic3Q62521 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Zic3Q62521 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Zic3Q62521 Nkain2-201ENSMUST00000092602 558 ntBASIC19.95■□□□□ 0.78
Zic3Q62521 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Zic3Q62521 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Zic3Q62521 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Zic3Q62521 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Zic3Q62521 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Zic3Q62521 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Zic3Q62521 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Zic3Q62521 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zic3Q62521 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zic3Q62521 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.91■□□□□ 0.78
Zic3Q62521 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.91■□□□□ 0.78
Zic3Q62521 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zic3Q62521 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Zic3Q62521 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Zic3Q62521 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zic3Q62521 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.9■□□□□ 0.78
Zic3Q62521 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zic3Q62521 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Zic3Q62521 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Zic3Q62521 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Zic3Q62521 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Zic3Q62521 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zic3Q62521 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.89■□□□□ 0.77
Zic3Q62521 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Zic3Q62521 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.88■□□□□ 0.77
Zic3Q62521 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Zic3Q62521 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Zic3Q62521 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Zic3Q62521 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Zic3Q62521 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Zic3Q62521 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.84■□□□□ 0.77
Zic3Q62521 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Zic3Q62521 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Zic3Q62521 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Zic3Q62521 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Zic3Q62521 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Zic3Q62521 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.83■□□□□ 0.76
Zic3Q62521 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Zic3Q62521 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.82■□□□□ 0.76
Zic3Q62521 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Zic3Q62521 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Zic3Q62521 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Zic3Q62521 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms