Protein–RNA interactions for Protein: Q61456

Ccna1, Cyclin-A1, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccna1Q61456 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ccna1Q61456 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ccna1Q61456 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccna1Q61456 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Ccna1Q61456 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Ccna1Q61456 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ccna1Q61456 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Ccna1Q61456 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ccna1Q61456 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.87■■□□□ 1.89
Ccna1Q61456 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ccna1Q61456 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ccna1Q61456 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ccna1Q61456 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Ccna1Q61456 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccna1Q61456 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
Ccna1Q61456 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.84■■□□□ 1.89
Ccna1Q61456 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
Ccna1Q61456 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ccna1Q61456 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ccna1Q61456 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ccna1Q61456 Gm30023-201ENSMUST00000197970 889 ntBASIC26.82■■□□□ 1.88
Ccna1Q61456 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.82■■□□□ 1.88
Ccna1Q61456 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ccna1Q61456 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.81■■□□□ 1.88
Ccna1Q61456 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Ccna1Q61456 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.8■■□□□ 1.88
Ccna1Q61456 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ccna1Q61456 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ccna1Q61456 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Ccna1Q61456 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Ccna1Q61456 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ccna1Q61456 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Ccna1Q61456 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ccna1Q61456 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Ccna1Q61456 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ccna1Q61456 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ccna1Q61456 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.75■■□□□ 1.87
Ccna1Q61456 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ccna1Q61456 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ccna1Q61456 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
Ccna1Q61456 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.74■■□□□ 1.87
Ccna1Q61456 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
Ccna1Q61456 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Ccna1Q61456 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
Ccna1Q61456 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ccna1Q61456 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Ccna1Q61456 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.72■■□□□ 1.87
Ccna1Q61456 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.72■■□□□ 1.87
Ccna1Q61456 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.72■■□□□ 1.87
Ccna1Q61456 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ccna1Q61456 Nkain2-201ENSMUST00000092602 558 ntBASIC26.71■■□□□ 1.87
Ccna1Q61456 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Ccna1Q61456 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
Ccna1Q61456 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ccna1Q61456 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.69■■□□□ 1.86
Ccna1Q61456 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
Ccna1Q61456 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ccna1Q61456 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Ccna1Q61456 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.68■■□□□ 1.86
Ccna1Q61456 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ccna1Q61456 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.67■■□□□ 1.86
Ccna1Q61456 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ccna1Q61456 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ccna1Q61456 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Ccna1Q61456 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ccna1Q61456 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.65■■□□□ 1.86
Ccna1Q61456 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
Ccna1Q61456 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
Ccna1Q61456 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Ccna1Q61456 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Ccna1Q61456 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Ccna1Q61456 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Ccna1Q61456 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ccna1Q61456 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Ccna1Q61456 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.6■■□□□ 1.85
Ccna1Q61456 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.6■■□□□ 1.85
Ccna1Q61456 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.59■■□□□ 1.85
Ccna1Q61456 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Ccna1Q61456 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ccna1Q61456 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.57■■□□□ 1.84
Ccna1Q61456 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Ccna1Q61456 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ccna1Q61456 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ccna1Q61456 Gm6821-201ENSMUST00000107540 542 ntBASIC26.56■■□□□ 1.84
Ccna1Q61456 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ccna1Q61456 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ccna1Q61456 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
Ccna1Q61456 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ccna1Q61456 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ccna1Q61456 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Ccna1Q61456 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ccna1Q61456 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.53■■□□□ 1.84
Ccna1Q61456 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ccna1Q61456 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Ccna1Q61456 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Ccna1Q61456 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ccna1Q61456 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Ccna1Q61456 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ccna1Q61456 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ccna1Q61456 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms