Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.93■□□□□ 0.94
Traf4Q61382 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Traf4Q61382 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Traf4Q61382 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Traf4Q61382 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Traf4Q61382 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Traf4Q61382 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Traf4Q61382 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Traf4Q61382 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Traf4Q61382 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Traf4Q61382 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Traf4Q61382 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Traf4Q61382 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Traf4Q61382 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Traf4Q61382 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Traf4Q61382 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Traf4Q61382 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Traf4Q61382 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.87■□□□□ 0.93
Traf4Q61382 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Traf4Q61382 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Traf4Q61382 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Traf4Q61382 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Traf4Q61382 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Traf4Q61382 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Traf4Q61382 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Traf4Q61382 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Traf4Q61382 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Traf4Q61382 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Traf4Q61382 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.83■□□□□ 0.93
Traf4Q61382 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.93
Traf4Q61382 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Traf4Q61382 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Traf4Q61382 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Traf4Q61382 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Traf4Q61382 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Traf4Q61382 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Traf4Q61382 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Traf4Q61382 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.8■□□□□ 0.92
Traf4Q61382 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.8■□□□□ 0.92
Traf4Q61382 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Traf4Q61382 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Traf4Q61382 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Traf4Q61382 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Traf4Q61382 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.79■□□□□ 0.92
Traf4Q61382 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Traf4Q61382 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Traf4Q61382 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Traf4Q61382 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Traf4Q61382 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Traf4Q61382 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Traf4Q61382 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Traf4Q61382 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Traf4Q61382 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Traf4Q61382 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Traf4Q61382 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Traf4Q61382 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Traf4Q61382 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Traf4Q61382 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Traf4Q61382 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Traf4Q61382 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Traf4Q61382 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Traf4Q61382 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Traf4Q61382 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Traf4Q61382 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Traf4Q61382 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Traf4Q61382 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Traf4Q61382 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Traf4Q61382 Gm7432-201ENSMUST00000210343 879 ntBASIC20.72■□□□□ 0.91
Traf4Q61382 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Traf4Q61382 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Traf4Q61382 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Traf4Q61382 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Traf4Q61382 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Traf4Q61382 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Traf4Q61382 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Traf4Q61382 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Traf4Q61382 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Traf4Q61382 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Traf4Q61382 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
Traf4Q61382 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.69■□□□□ 0.9
Traf4Q61382 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Traf4Q61382 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
Traf4Q61382 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Traf4Q61382 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Traf4Q61382 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Traf4Q61382 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Traf4Q61382 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Traf4Q61382 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Traf4Q61382 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.66■□□□□ 0.9
Traf4Q61382 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Traf4Q61382 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Traf4Q61382 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.65■□□□□ 0.9
Traf4Q61382 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Traf4Q61382 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.64■□□□□ 0.89
Traf4Q61382 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.64■□□□□ 0.89
Traf4Q61382 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Traf4Q61382 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Traf4Q61382 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Traf4Q61382 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Traf4Q61382 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 143.4 ms