Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trav6-2Q5R1I4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.29■■□□□ 1
Trav6-2Q5R1I4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trav6-2Q5R1I4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trav6-2Q5R1I4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trav6-2Q5R1I4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trav6-2Q5R1I4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trav6-2Q5R1I4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trav6-2Q5R1I4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Trav6-2Q5R1I4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav6-2Q5R1I4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav6-2Q5R1I4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
Trav6-2Q5R1I4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav6-2Q5R1I4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.26■□□□□ 0.99
Trav6-2Q5R1I4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav6-2Q5R1I4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trav6-2Q5R1I4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trav6-2Q5R1I4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.24■□□□□ 0.99
Trav6-2Q5R1I4 Mir6538-201ENSMUST00000183713 110 ntBASIC21.23■□□□□ 0.99
Trav6-2Q5R1I4 Gm6311-201ENSMUST00000073790 878 ntBASIC21.23■□□□□ 0.99
Trav6-2Q5R1I4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav6-2Q5R1I4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Trav6-2Q5R1I4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav6-2Q5R1I4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trav6-2Q5R1I4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.22■□□□□ 0.99
Trav6-2Q5R1I4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav6-2Q5R1I4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav6-2Q5R1I4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav6-2Q5R1I4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav6-2Q5R1I4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trav6-2Q5R1I4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav6-2Q5R1I4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trav6-2Q5R1I4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trav6-2Q5R1I4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trav6-2Q5R1I4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trav6-2Q5R1I4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trav6-2Q5R1I4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav6-2Q5R1I4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav6-2Q5R1I4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trav6-2Q5R1I4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Trav6-2Q5R1I4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trav6-2Q5R1I4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav6-2Q5R1I4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav6-2Q5R1I4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trav6-2Q5R1I4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trav6-2Q5R1I4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav6-2Q5R1I4 Gm11175-201ENSMUST00000116172 543 ntBASIC21.16■□□□□ 0.98
Trav6-2Q5R1I4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Trav6-2Q5R1I4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trav6-2Q5R1I4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Trav6-2Q5R1I4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Trav6-2Q5R1I4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trav6-2Q5R1I4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trav6-2Q5R1I4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.13■□□□□ 0.97
Trav6-2Q5R1I4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trav6-2Q5R1I4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Trav6-2Q5R1I4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav6-2Q5R1I4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav6-2Q5R1I4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.1■□□□□ 0.97
Trav6-2Q5R1I4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trav6-2Q5R1I4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav6-2Q5R1I4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.09■□□□□ 0.97
Trav6-2Q5R1I4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trav6-2Q5R1I4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
Trav6-2Q5R1I4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav6-2Q5R1I4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trav6-2Q5R1I4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav6-2Q5R1I4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav6-2Q5R1I4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav6-2Q5R1I4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.06■□□□□ 0.96
Trav6-2Q5R1I4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Trav6-2Q5R1I4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.06■□□□□ 0.96
Trav6-2Q5R1I4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav6-2Q5R1I4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.05■□□□□ 0.96
Trav6-2Q5R1I4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav6-2Q5R1I4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav6-2Q5R1I4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav6-2Q5R1I4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav6-2Q5R1I4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.02■□□□□ 0.96
Trav6-2Q5R1I4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav6-2Q5R1I4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.01■□□□□ 0.95
Trav6-2Q5R1I4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav6-2Q5R1I4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav6-2Q5R1I4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trav6-2Q5R1I4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Trav6-2Q5R1I4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21■□□□□ 0.95
Trav6-2Q5R1I4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav6-2Q5R1I4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Trav6-2Q5R1I4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Trav6-2Q5R1I4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Trav6-2Q5R1I4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Trav6-2Q5R1I4 Cap2-205ENSMUST00000225824 1634 ntBASIC20.99■□□□□ 0.95
Trav6-2Q5R1I4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Trav6-2Q5R1I4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trav6-2Q5R1I4 Gm4799-201ENSMUST00000095396 657 ntBASIC20.98■□□□□ 0.95
Trav6-2Q5R1I4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Trav6-2Q5R1I4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trav6-2Q5R1I4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav6-2Q5R1I4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav6-2Q5R1I4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms