Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trdv4Q5R1A3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Trdv4Q5R1A3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trdv4Q5R1A3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.79■□□□□ 0.76
Trdv4Q5R1A3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trdv4Q5R1A3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trdv4Q5R1A3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trdv4Q5R1A3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trdv4Q5R1A3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.76■□□□□ 0.75
Trdv4Q5R1A3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.75■□□□□ 0.75
Trdv4Q5R1A3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trdv4Q5R1A3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trdv4Q5R1A3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trdv4Q5R1A3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trdv4Q5R1A3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trdv4Q5R1A3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trdv4Q5R1A3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.72■□□□□ 0.75
Trdv4Q5R1A3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trdv4Q5R1A3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trdv4Q5R1A3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trdv4Q5R1A3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trdv4Q5R1A3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trdv4Q5R1A3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trdv4Q5R1A3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trdv4Q5R1A3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trdv4Q5R1A3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trdv4Q5R1A3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.68■□□□□ 0.74
Trdv4Q5R1A3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trdv4Q5R1A3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trdv4Q5R1A3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.67■□□□□ 0.74
Trdv4Q5R1A3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Trdv4Q5R1A3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trdv4Q5R1A3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trdv4Q5R1A3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trdv4Q5R1A3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trdv4Q5R1A3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trdv4Q5R1A3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trdv4Q5R1A3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trdv4Q5R1A3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trdv4Q5R1A3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Trdv4Q5R1A3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trdv4Q5R1A3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trdv4Q5R1A3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trdv4Q5R1A3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trdv4Q5R1A3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Trdv4Q5R1A3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Trdv4Q5R1A3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trdv4Q5R1A3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.63■□□□□ 0.73
Trdv4Q5R1A3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trdv4Q5R1A3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trdv4Q5R1A3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trdv4Q5R1A3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trdv4Q5R1A3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trdv4Q5R1A3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trdv4Q5R1A3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trdv4Q5R1A3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trdv4Q5R1A3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trdv4Q5R1A3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trdv4Q5R1A3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trdv4Q5R1A3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trdv4Q5R1A3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trdv4Q5R1A3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trdv4Q5R1A3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trdv4Q5R1A3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trdv4Q5R1A3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trdv4Q5R1A3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trdv4Q5R1A3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trdv4Q5R1A3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trdv4Q5R1A3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trdv4Q5R1A3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Trdv4Q5R1A3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trdv4Q5R1A3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trdv4Q5R1A3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trdv4Q5R1A3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.55■□□□□ 0.72
Trdv4Q5R1A3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trdv4Q5R1A3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trdv4Q5R1A3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trdv4Q5R1A3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trdv4Q5R1A3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Trdv4Q5R1A3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trdv4Q5R1A3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trdv4Q5R1A3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
Trdv4Q5R1A3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trdv4Q5R1A3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trdv4Q5R1A3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trdv4Q5R1A3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.51■□□□□ 0.71
Trdv4Q5R1A3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Trdv4Q5R1A3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trdv4Q5R1A3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Trdv4Q5R1A3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.5■□□□□ 0.71
Trdv4Q5R1A3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trdv4Q5R1A3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trdv4Q5R1A3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trdv4Q5R1A3 Gm30023-201ENSMUST00000197970 889 ntBASIC19.49■□□□□ 0.71
Trdv4Q5R1A3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trdv4Q5R1A3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trdv4Q5R1A3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trdv4Q5R1A3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trdv4Q5R1A3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.48■□□□□ 0.71
Trdv4Q5R1A3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms