Protein–RNA interactions for Protein: Q3V3E1

Ubash3a, Ubiquitin-associated and SH3 domain-containing protein A, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubash3aQ3V3E1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC27.57■■■□□ 2
Ubash3aQ3V3E1 Gm9397-201ENSMUST00000200125 605 ntBASIC27.57■■■□□ 2
Ubash3aQ3V3E1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC27.57■■■□□ 2
Ubash3aQ3V3E1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
Ubash3aQ3V3E1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC27.56■■■□□ 2
Ubash3aQ3V3E1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Ubash3aQ3V3E1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.56■■■□□ 2
Ubash3aQ3V3E1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC27.56■■■□□ 2
Ubash3aQ3V3E1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Ubash3aQ3V3E1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
Ubash3aQ3V3E1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC27.55■■■□□ 2
Ubash3aQ3V3E1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC27.55■■■□□ 2
Ubash3aQ3V3E1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ubash3aQ3V3E1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Ubash3aQ3V3E1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Ubash3aQ3V3E1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.53■■■□□ 2
Ubash3aQ3V3E1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.53■■■□□ 2
Ubash3aQ3V3E1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.53■■■□□ 2
Ubash3aQ3V3E1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Ubash3aQ3V3E1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Ubash3aQ3V3E1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
Ubash3aQ3V3E1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Ubash3aQ3V3E1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27.51■■□□□ 1.99
Ubash3aQ3V3E1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Ubash3aQ3V3E1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Ubash3aQ3V3E1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ubash3aQ3V3E1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Ubash3aQ3V3E1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Ubash3aQ3V3E1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.47■■□□□ 1.99
Ubash3aQ3V3E1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
Ubash3aQ3V3E1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.99
Ubash3aQ3V3E1 Gm24970-201ENSMUST00000175582 82 ntBASIC27.45■■□□□ 1.98
Ubash3aQ3V3E1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.98
Ubash3aQ3V3E1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Ubash3aQ3V3E1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC27.44■■□□□ 1.98
Ubash3aQ3V3E1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ubash3aQ3V3E1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ubash3aQ3V3E1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.43■■□□□ 1.98
Ubash3aQ3V3E1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.43■■□□□ 1.98
Ubash3aQ3V3E1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
Ubash3aQ3V3E1 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.42■■□□□ 1.98
Ubash3aQ3V3E1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC27.41■■□□□ 1.98
Ubash3aQ3V3E1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Ubash3aQ3V3E1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Ubash3aQ3V3E1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Ubash3aQ3V3E1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Ubash3aQ3V3E1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Ubash3aQ3V3E1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Ubash3aQ3V3E1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Ubash3aQ3V3E1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.97
Ubash3aQ3V3E1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ubash3aQ3V3E1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
Ubash3aQ3V3E1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ubash3aQ3V3E1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Ubash3aQ3V3E1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.37■■□□□ 1.97
Ubash3aQ3V3E1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ubash3aQ3V3E1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.36■■□□□ 1.97
Ubash3aQ3V3E1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ubash3aQ3V3E1 Gm45855-201ENSMUST00000212546 880 ntBASIC27.35■■□□□ 1.97
Ubash3aQ3V3E1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Ubash3aQ3V3E1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.35■■□□□ 1.97
Ubash3aQ3V3E1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ubash3aQ3V3E1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.34■■□□□ 1.97
Ubash3aQ3V3E1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ubash3aQ3V3E1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ubash3aQ3V3E1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ubash3aQ3V3E1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ubash3aQ3V3E1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ubash3aQ3V3E1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ubash3aQ3V3E1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ubash3aQ3V3E1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ubash3aQ3V3E1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Ubash3aQ3V3E1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Ubash3aQ3V3E1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ubash3aQ3V3E1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ubash3aQ3V3E1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ubash3aQ3V3E1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Ubash3aQ3V3E1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.96
Ubash3aQ3V3E1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Ubash3aQ3V3E1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ubash3aQ3V3E1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC27.22■■□□□ 1.95
Ubash3aQ3V3E1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ubash3aQ3V3E1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.95
Ubash3aQ3V3E1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.2■■□□□ 1.95
Ubash3aQ3V3E1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ubash3aQ3V3E1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Ubash3aQ3V3E1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.19■■□□□ 1.94
Ubash3aQ3V3E1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ubash3aQ3V3E1 Gm30023-201ENSMUST00000197970 889 ntBASIC27.18■■□□□ 1.94
Ubash3aQ3V3E1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
Ubash3aQ3V3E1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC27.17■■□□□ 1.94
Ubash3aQ3V3E1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Ubash3aQ3V3E1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Ubash3aQ3V3E1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Ubash3aQ3V3E1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ubash3aQ3V3E1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ubash3aQ3V3E1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ubash3aQ3V3E1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Ubash3aQ3V3E1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.93
Ubash3aQ3V3E1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms