Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gfra1P97785 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.78■□□□□ 0.76
Gfra1P97785 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.77■□□□□ 0.76
Gfra1P97785 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.77■□□□□ 0.76
Gfra1P97785 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gfra1P97785 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Gfra1P97785 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gfra1P97785 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gfra1P97785 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.76■□□□□ 0.75
Gfra1P97785 Gm7432-201ENSMUST00000210343 879 ntBASIC19.76■□□□□ 0.75
Gfra1P97785 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gfra1P97785 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gfra1P97785 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gfra1P97785 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gfra1P97785 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gfra1P97785 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Gfra1P97785 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gfra1P97785 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.74■□□□□ 0.75
Gfra1P97785 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.74■□□□□ 0.75
Gfra1P97785 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gfra1P97785 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gfra1P97785 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gfra1P97785 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gfra1P97785 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gfra1P97785 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gfra1P97785 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gfra1P97785 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gfra1P97785 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.71■□□□□ 0.75
Gfra1P97785 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gfra1P97785 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gfra1P97785 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gfra1P97785 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.7■□□□□ 0.74
Gfra1P97785 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gfra1P97785 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.69■□□□□ 0.74
Gfra1P97785 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Gfra1P97785 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.68■□□□□ 0.74
Gfra1P97785 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gfra1P97785 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gfra1P97785 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gfra1P97785 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.67■□□□□ 0.74
Gfra1P97785 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.67■□□□□ 0.74
Gfra1P97785 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gfra1P97785 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gfra1P97785 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Gfra1P97785 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gfra1P97785 Gm30023-201ENSMUST00000197970 889 ntBASIC19.64■□□□□ 0.73
Gfra1P97785 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.64■□□□□ 0.73
Gfra1P97785 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
Gfra1P97785 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gfra1P97785 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gfra1P97785 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.63■□□□□ 0.73
Gfra1P97785 Gm11599-201ENSMUST00000118720 878 ntBASIC19.63■□□□□ 0.73
Gfra1P97785 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gfra1P97785 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
Gfra1P97785 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gfra1P97785 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gfra1P97785 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gfra1P97785 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gfra1P97785 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Gfra1P97785 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gfra1P97785 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gfra1P97785 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.6■□□□□ 0.73
Gfra1P97785 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gfra1P97785 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gfra1P97785 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Gfra1P97785 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
Gfra1P97785 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gfra1P97785 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gfra1P97785 Amer2-203ENSMUST00000225247 2662 ntBASIC19.59■□□□□ 0.73
Gfra1P97785 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gfra1P97785 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gfra1P97785 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gfra1P97785 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gfra1P97785 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.56■□□□□ 0.72
Gfra1P97785 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.56■□□□□ 0.72
Gfra1P97785 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gfra1P97785 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gfra1P97785 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gfra1P97785 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gfra1P97785 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Gfra1P97785 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.53■□□□□ 0.72
Gfra1P97785 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gfra1P97785 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gfra1P97785 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gfra1P97785 Particl-201ENSMUST00000205370 1560 ntBASIC19.53■□□□□ 0.72
Gfra1P97785 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gfra1P97785 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.52■□□□□ 0.72
Gfra1P97785 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Gfra1P97785 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gfra1P97785 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.51■□□□□ 0.71
Gfra1P97785 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Gfra1P97785 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gfra1P97785 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gfra1P97785 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.5■□□□□ 0.71
Gfra1P97785 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gfra1P97785 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gfra1P97785 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gfra1P97785 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Gfra1P97785 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gfra1P97785 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms