Protein–RNA interactions for Protein: P35583

Foxa2, Hepatocyte nuclear factor 3-beta, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa2P35583 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Foxa2P35583 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Foxa2P35583 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.11■□□□□ 0.81
Foxa2P35583 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Foxa2P35583 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Foxa2P35583 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Foxa2P35583 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Foxa2P35583 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Foxa2P35583 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.1■□□□□ 0.81
Foxa2P35583 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Foxa2P35583 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.09■□□□□ 0.81
Foxa2P35583 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.09■□□□□ 0.81
Foxa2P35583 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Foxa2P35583 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Foxa2P35583 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Foxa2P35583 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Foxa2P35583 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Foxa2P35583 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Foxa2P35583 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Foxa2P35583 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.07■□□□□ 0.8
Foxa2P35583 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Foxa2P35583 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Foxa2P35583 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.06■□□□□ 0.8
Foxa2P35583 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Foxa2P35583 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
Foxa2P35583 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxa2P35583 Gm45855-201ENSMUST00000212546 880 ntBASIC20.05■□□□□ 0.8
Foxa2P35583 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxa2P35583 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxa2P35583 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxa2P35583 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Foxa2P35583 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Foxa2P35583 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Foxa2P35583 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Foxa2P35583 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxa2P35583 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Foxa2P35583 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Foxa2P35583 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxa2P35583 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Foxa2P35583 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.03■□□□□ 0.8
Foxa2P35583 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Foxa2P35583 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Foxa2P35583 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Foxa2P35583 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxa2P35583 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Foxa2P35583 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxa2P35583 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Foxa2P35583 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20■□□□□ 0.79
Foxa2P35583 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxa2P35583 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxa2P35583 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Foxa2P35583 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxa2P35583 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Foxa2P35583 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Foxa2P35583 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxa2P35583 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Foxa2P35583 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Foxa2P35583 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Foxa2P35583 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Foxa2P35583 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxa2P35583 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Foxa2P35583 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Foxa2P35583 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Foxa2P35583 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Foxa2P35583 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Foxa2P35583 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Foxa2P35583 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Foxa2P35583 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Foxa2P35583 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
Foxa2P35583 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Foxa2P35583 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Foxa2P35583 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.9■□□□□ 0.78
Foxa2P35583 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Foxa2P35583 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Foxa2P35583 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Foxa2P35583 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Foxa2P35583 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.9■□□□□ 0.78
Foxa2P35583 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Foxa2P35583 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Foxa2P35583 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Foxa2P35583 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Foxa2P35583 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Foxa2P35583 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Foxa2P35583 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Foxa2P35583 Gm30023-201ENSMUST00000197970 889 ntBASIC19.87■□□□□ 0.77
Foxa2P35583 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Foxa2P35583 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Foxa2P35583 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Foxa2P35583 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Foxa2P35583 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Foxa2P35583 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Foxa2P35583 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Foxa2P35583 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.85■□□□□ 0.77
Foxa2P35583 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Foxa2P35583 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Foxa2P35583 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Foxa2P35583 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Foxa2P35583 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.84■□□□□ 0.77
Foxa2P35583 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Foxa2P35583 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms