Protein–RNA interactions for Protein: P27790

Cenpb, Major centromere autoantigen B, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CenpbP27790 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CenpbP27790 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CenpbP27790 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CenpbP27790 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CenpbP27790 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
CenpbP27790 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
CenpbP27790 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC31.75■■■□□ 2.67
CenpbP27790 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CenpbP27790 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
CenpbP27790 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CenpbP27790 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CenpbP27790 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CenpbP27790 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
CenpbP27790 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
CenpbP27790 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CenpbP27790 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CenpbP27790 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
CenpbP27790 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC31.7■■■□□ 2.67
CenpbP27790 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CenpbP27790 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC31.69■■■□□ 2.66
CenpbP27790 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC31.69■■■□□ 2.66
CenpbP27790 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CenpbP27790 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
CenpbP27790 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CenpbP27790 Gm26115-201ENSMUST00000175605 87 ntBASIC31.68■■■□□ 2.66
CenpbP27790 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CenpbP27790 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CenpbP27790 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CenpbP27790 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC31.67■■■□□ 2.66
CenpbP27790 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CenpbP27790 Gm6277-202ENSMUST00000224036 2779 ntBASIC31.64■■■□□ 2.66
CenpbP27790 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC31.64■■■□□ 2.66
CenpbP27790 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
CenpbP27790 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
CenpbP27790 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CenpbP27790 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
CenpbP27790 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CenpbP27790 Gm8109-201ENSMUST00000194076 746 ntBASIC31.62■■■□□ 2.65
CenpbP27790 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CenpbP27790 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CenpbP27790 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CenpbP27790 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC31.61■■■□□ 2.65
CenpbP27790 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.61■■■□□ 2.65
CenpbP27790 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
CenpbP27790 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
CenpbP27790 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CenpbP27790 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CenpbP27790 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CenpbP27790 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CenpbP27790 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CenpbP27790 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CenpbP27790 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC31.54■■■□□ 2.64
CenpbP27790 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CenpbP27790 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC31.54■■■□□ 2.64
CenpbP27790 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
CenpbP27790 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
CenpbP27790 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
CenpbP27790 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.51■■■□□ 2.63
CenpbP27790 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
CenpbP27790 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CenpbP27790 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CenpbP27790 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CenpbP27790 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
CenpbP27790 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
CenpbP27790 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CenpbP27790 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
CenpbP27790 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CenpbP27790 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CenpbP27790 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CenpbP27790 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
CenpbP27790 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
CenpbP27790 Gm27322-201ENSMUST00000184007 104 ntBASIC31.48■■■□□ 2.63
CenpbP27790 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CenpbP27790 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
CenpbP27790 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
CenpbP27790 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
CenpbP27790 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
CenpbP27790 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
CenpbP27790 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CenpbP27790 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
CenpbP27790 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
CenpbP27790 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CenpbP27790 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CenpbP27790 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
CenpbP27790 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CenpbP27790 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CenpbP27790 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CenpbP27790 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CenpbP27790 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CenpbP27790 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CenpbP27790 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC31.4■■■□□ 2.62
CenpbP27790 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CenpbP27790 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
CenpbP27790 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
CenpbP27790 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
CenpbP27790 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CenpbP27790 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CenpbP27790 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CenpbP27790 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CenpbP27790 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms