Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cd40P27512 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cd40P27512 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.79■■□□□ 1.08
Cd40P27512 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.79■■□□□ 1.08
Cd40P27512 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.79■■□□□ 1.08
Cd40P27512 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cd40P27512 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Cd40P27512 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cd40P27512 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cd40P27512 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cd40P27512 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Cd40P27512 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cd40P27512 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cd40P27512 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cd40P27512 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cd40P27512 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cd40P27512 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Cd40P27512 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Cd40P27512 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cd40P27512 Gm30023-201ENSMUST00000197970 889 ntBASIC21.74■■□□□ 1.07
Cd40P27512 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.73■■□□□ 1.07
Cd40P27512 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cd40P27512 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cd40P27512 Nkain2-201ENSMUST00000092602 558 ntBASIC21.73■■□□□ 1.07
Cd40P27512 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cd40P27512 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cd40P27512 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Cd40P27512 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cd40P27512 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cd40P27512 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.71■■□□□ 1.07
Cd40P27512 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Cd40P27512 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
Cd40P27512 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cd40P27512 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.7■■□□□ 1.06
Cd40P27512 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cd40P27512 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.69■■□□□ 1.06
Cd40P27512 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cd40P27512 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
Cd40P27512 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cd40P27512 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cd40P27512 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cd40P27512 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.66■■□□□ 1.06
Cd40P27512 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cd40P27512 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cd40P27512 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Cd40P27512 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cd40P27512 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cd40P27512 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
Cd40P27512 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cd40P27512 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cd40P27512 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cd40P27512 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.63■■□□□ 1.05
Cd40P27512 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Cd40P27512 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cd40P27512 Gm6821-201ENSMUST00000107540 542 ntBASIC21.62■■□□□ 1.05
Cd40P27512 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cd40P27512 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cd40P27512 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.61■■□□□ 1.05
Cd40P27512 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cd40P27512 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cd40P27512 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Cd40P27512 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.59■■□□□ 1.05
Cd40P27512 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cd40P27512 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cd40P27512 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cd40P27512 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cd40P27512 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cd40P27512 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.56■■□□□ 1.04
Cd40P27512 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.56■■□□□ 1.04
Cd40P27512 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cd40P27512 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cd40P27512 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Cd40P27512 Gm8503-201ENSMUST00000118131 455 ntBASIC21.55■■□□□ 1.04
Cd40P27512 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Cd40P27512 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cd40P27512 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cd40P27512 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cd40P27512 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.53■■□□□ 1.04
Cd40P27512 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.53■■□□□ 1.04
Cd40P27512 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cd40P27512 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cd40P27512 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cd40P27512 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cd40P27512 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.52■■□□□ 1.04
Cd40P27512 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.52■■□□□ 1.04
Cd40P27512 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cd40P27512 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Cd40P27512 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cd40P27512 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cd40P27512 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cd40P27512 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.49■■□□□ 1.03
Cd40P27512 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cd40P27512 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.48■■□□□ 1.03
Cd40P27512 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cd40P27512 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cd40P27512 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Cd40P27512 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cd40P27512 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.47■■□□□ 1.03
Cd40P27512 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cd40P27512 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms