Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col8a2P25318 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col8a2P25318 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col8a2P25318 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col8a2P25318 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col8a2P25318 Gm30023-201ENSMUST00000197970 889 ntBASIC20.22■□□□□ 0.83
Col8a2P25318 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col8a2P25318 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.21■□□□□ 0.83
Col8a2P25318 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.21■□□□□ 0.83
Col8a2P25318 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.21■□□□□ 0.83
Col8a2P25318 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col8a2P25318 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Col8a2P25318 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Col8a2P25318 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col8a2P25318 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col8a2P25318 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col8a2P25318 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.18■□□□□ 0.82
Col8a2P25318 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Col8a2P25318 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col8a2P25318 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.16■□□□□ 0.82
Col8a2P25318 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col8a2P25318 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Col8a2P25318 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Col8a2P25318 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col8a2P25318 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col8a2P25318 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col8a2P25318 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col8a2P25318 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col8a2P25318 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.14■□□□□ 0.81
Col8a2P25318 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.13■□□□□ 0.81
Col8a2P25318 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Col8a2P25318 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col8a2P25318 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col8a2P25318 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col8a2P25318 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col8a2P25318 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Col8a2P25318 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Col8a2P25318 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.11■□□□□ 0.81
Col8a2P25318 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col8a2P25318 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.1■□□□□ 0.81
Col8a2P25318 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col8a2P25318 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col8a2P25318 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col8a2P25318 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col8a2P25318 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.09■□□□□ 0.81
Col8a2P25318 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col8a2P25318 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.08■□□□□ 0.81
Col8a2P25318 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.08■□□□□ 0.81
Col8a2P25318 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col8a2P25318 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
Col8a2P25318 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Col8a2P25318 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col8a2P25318 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col8a2P25318 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Col8a2P25318 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col8a2P25318 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col8a2P25318 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Col8a2P25318 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.01■□□□□ 0.79
Col8a2P25318 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Col8a2P25318 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col8a2P25318 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Col8a2P25318 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col8a2P25318 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20■□□□□ 0.79
Col8a2P25318 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col8a2P25318 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col8a2P25318 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Col8a2P25318 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col8a2P25318 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col8a2P25318 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col8a2P25318 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.98■□□□□ 0.79
Col8a2P25318 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col8a2P25318 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col8a2P25318 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col8a2P25318 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col8a2P25318 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Col8a2P25318 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Col8a2P25318 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col8a2P25318 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col8a2P25318 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col8a2P25318 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col8a2P25318 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col8a2P25318 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col8a2P25318 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col8a2P25318 Gm7432-201ENSMUST00000210343 879 ntBASIC19.91■□□□□ 0.78
Col8a2P25318 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col8a2P25318 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col8a2P25318 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col8a2P25318 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col8a2P25318 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col8a2P25318 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
Col8a2P25318 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col8a2P25318 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col8a2P25318 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.89■□□□□ 0.77
Col8a2P25318 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.89■□□□□ 0.77
Col8a2P25318 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col8a2P25318 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col8a2P25318 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col8a2P25318 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col8a2P25318 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Col8a2P25318 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms