Protein–RNA interactions for Protein: P24399

Znf239, Zinc finger protein 239, mousemouse

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf239P24399 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Znf239P24399 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Znf239P24399 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.89■□□□□ 0.45
Znf239P24399 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Znf239P24399 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Znf239P24399 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Znf239P24399 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Znf239P24399 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Znf239P24399 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.86■□□□□ 0.45
Znf239P24399 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Znf239P24399 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Znf239P24399 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Znf239P24399 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Znf239P24399 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Znf239P24399 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
Znf239P24399 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Znf239P24399 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Znf239P24399 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Znf239P24399 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Znf239P24399 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Znf239P24399 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Znf239P24399 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Znf239P24399 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Znf239P24399 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Znf239P24399 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Znf239P24399 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Znf239P24399 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Znf239P24399 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Znf239P24399 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Znf239P24399 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Znf239P24399 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Znf239P24399 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Znf239P24399 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Znf239P24399 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Znf239P24399 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Znf239P24399 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Znf239P24399 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Znf239P24399 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Znf239P24399 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Znf239P24399 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Znf239P24399 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Znf239P24399 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Znf239P24399 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Znf239P24399 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Znf239P24399 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Znf239P24399 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Znf239P24399 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Znf239P24399 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Znf239P24399 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Znf239P24399 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Znf239P24399 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Znf239P24399 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Znf239P24399 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Znf239P24399 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Znf239P24399 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.74■□□□□ 0.43
Znf239P24399 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Znf239P24399 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Znf239P24399 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Znf239P24399 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Znf239P24399 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Znf239P24399 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Znf239P24399 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Znf239P24399 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Znf239P24399 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Znf239P24399 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Znf239P24399 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Znf239P24399 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Znf239P24399 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.7■□□□□ 0.42
Znf239P24399 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Znf239P24399 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Znf239P24399 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Znf239P24399 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Znf239P24399 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.69■□□□□ 0.42
Znf239P24399 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Znf239P24399 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.68■□□□□ 0.42
Znf239P24399 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Znf239P24399 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Znf239P24399 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Znf239P24399 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Znf239P24399 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Znf239P24399 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Znf239P24399 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Znf239P24399 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Znf239P24399 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Znf239P24399 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Znf239P24399 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Znf239P24399 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Znf239P24399 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Znf239P24399 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Znf239P24399 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.65■□□□□ 0.42
Znf239P24399 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Znf239P24399 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Znf239P24399 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Znf239P24399 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Znf239P24399 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Znf239P24399 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Znf239P24399 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Znf239P24399 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.64■□□□□ 0.41
Znf239P24399 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Znf239P24399 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms