Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Irf8P23611 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Irf8P23611 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.13■■□□□ 1.77
Irf8P23611 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Irf8P23611 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Irf8P23611 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
Irf8P23611 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Irf8P23611 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Irf8P23611 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Irf8P23611 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Irf8P23611 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
Irf8P23611 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Irf8P23611 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Irf8P23611 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.07■■□□□ 1.76
Irf8P23611 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Irf8P23611 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Irf8P23611 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.07■■□□□ 1.76
Irf8P23611 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Irf8P23611 Gm30023-201ENSMUST00000197970 889 ntBASIC26.06■■□□□ 1.76
Irf8P23611 Nkain2-201ENSMUST00000092602 558 ntBASIC26.06■■□□□ 1.76
Irf8P23611 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Irf8P23611 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Irf8P23611 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Irf8P23611 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Irf8P23611 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Irf8P23611 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Irf8P23611 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.03■■□□□ 1.76
Irf8P23611 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
Irf8P23611 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Irf8P23611 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.01■■□□□ 1.75
Irf8P23611 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26■■□□□ 1.75
Irf8P23611 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26■■□□□ 1.75
Irf8P23611 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Irf8P23611 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.98■■□□□ 1.75
Irf8P23611 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Irf8P23611 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Irf8P23611 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Irf8P23611 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Irf8P23611 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Irf8P23611 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Irf8P23611 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Irf8P23611 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.96■■□□□ 1.75
Irf8P23611 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
Irf8P23611 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.96■■□□□ 1.75
Irf8P23611 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Irf8P23611 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
Irf8P23611 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Irf8P23611 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Irf8P23611 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Irf8P23611 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Irf8P23611 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Irf8P23611 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Irf8P23611 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.9■■□□□ 1.74
Irf8P23611 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Irf8P23611 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.9■■□□□ 1.74
Irf8P23611 Gm6821-201ENSMUST00000107540 542 ntBASIC25.9■■□□□ 1.74
Irf8P23611 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.9■■□□□ 1.74
Irf8P23611 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Irf8P23611 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Irf8P23611 Gm8503-201ENSMUST00000118131 455 ntBASIC25.88■■□□□ 1.73
Irf8P23611 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Irf8P23611 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Irf8P23611 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Irf8P23611 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.85■■□□□ 1.73
Irf8P23611 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Irf8P23611 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Irf8P23611 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.84■■□□□ 1.73
Irf8P23611 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Irf8P23611 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Irf8P23611 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.83■■□□□ 1.73
Irf8P23611 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.83■■□□□ 1.73
Irf8P23611 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.83■■□□□ 1.72
Irf8P23611 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Irf8P23611 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Irf8P23611 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
Irf8P23611 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Irf8P23611 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Irf8P23611 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Irf8P23611 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Irf8P23611 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.79■■□□□ 1.72
Irf8P23611 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Irf8P23611 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
Irf8P23611 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Irf8P23611 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
Irf8P23611 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Irf8P23611 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Irf8P23611 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.77■■□□□ 1.72
Irf8P23611 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Irf8P23611 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.76■■□□□ 1.71
Irf8P23611 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.76■■□□□ 1.71
Irf8P23611 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.76■■□□□ 1.71
Irf8P23611 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Irf8P23611 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
Irf8P23611 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
Irf8P23611 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Irf8P23611 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Irf8P23611 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Irf8P23611 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.74■■□□□ 1.71
Irf8P23611 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Irf8P23611 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms