Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.55■□□□□ 0.72
LtaP09225 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LtaP09225 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LtaP09225 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LtaP09225 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LtaP09225 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LtaP09225 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
LtaP09225 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.53■□□□□ 0.72
LtaP09225 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
LtaP09225 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LtaP09225 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.52■□□□□ 0.72
LtaP09225 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.52■□□□□ 0.72
LtaP09225 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.52■□□□□ 0.72
LtaP09225 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
LtaP09225 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LtaP09225 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LtaP09225 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LtaP09225 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
LtaP09225 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
LtaP09225 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.5■□□□□ 0.71
LtaP09225 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LtaP09225 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LtaP09225 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.47■□□□□ 0.71
LtaP09225 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.47■□□□□ 0.71
LtaP09225 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LtaP09225 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.46■□□□□ 0.71
LtaP09225 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LtaP09225 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LtaP09225 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LtaP09225 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LtaP09225 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LtaP09225 Amer2-203ENSMUST00000225247 2662 ntBASIC19.45■□□□□ 0.7
LtaP09225 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LtaP09225 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LtaP09225 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
LtaP09225 Gm30023-201ENSMUST00000197970 889 ntBASIC19.44■□□□□ 0.7
LtaP09225 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LtaP09225 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LtaP09225 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.43■□□□□ 0.7
LtaP09225 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LtaP09225 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LtaP09225 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LtaP09225 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
LtaP09225 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.42■□□□□ 0.7
LtaP09225 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LtaP09225 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LtaP09225 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LtaP09225 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
LtaP09225 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LtaP09225 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.4■□□□□ 0.7
LtaP09225 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LtaP09225 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LtaP09225 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LtaP09225 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LtaP09225 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LtaP09225 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.38■□□□□ 0.69
LtaP09225 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LtaP09225 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LtaP09225 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
LtaP09225 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LtaP09225 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LtaP09225 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LtaP09225 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LtaP09225 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.36■□□□□ 0.69
LtaP09225 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.35■□□□□ 0.69
LtaP09225 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LtaP09225 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LtaP09225 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LtaP09225 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LtaP09225 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LtaP09225 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.34■□□□□ 0.69
LtaP09225 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LtaP09225 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LtaP09225 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LtaP09225 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LtaP09225 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.33■□□□□ 0.69
LtaP09225 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.33■□□□□ 0.69
LtaP09225 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.33■□□□□ 0.68
LtaP09225 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LtaP09225 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LtaP09225 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LtaP09225 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.31■□□□□ 0.68
LtaP09225 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LtaP09225 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LtaP09225 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LtaP09225 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LtaP09225 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LtaP09225 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LtaP09225 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LtaP09225 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LtaP09225 Gm7432-201ENSMUST00000210343 879 ntBASIC19.28■□□□□ 0.68
LtaP09225 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LtaP09225 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LtaP09225 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LtaP09225 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LtaP09225 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LtaP09225 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LtaP09225 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LtaP09225 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
LtaP09225 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms