Protein–RNA interactions for Protein: P09084

Pax1, Paired box protein Pax-1, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax1P09084 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.31■□□□□ 0.68
Pax1P09084 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pax1P09084 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.3■□□□□ 0.68
Pax1P09084 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pax1P09084 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pax1P09084 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pax1P09084 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pax1P09084 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pax1P09084 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pax1P09084 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pax1P09084 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pax1P09084 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.28■□□□□ 0.68
Pax1P09084 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pax1P09084 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pax1P09084 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pax1P09084 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pax1P09084 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pax1P09084 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pax1P09084 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Pax1P09084 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pax1P09084 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pax1P09084 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.26■□□□□ 0.67
Pax1P09084 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pax1P09084 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pax1P09084 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pax1P09084 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pax1P09084 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pax1P09084 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pax1P09084 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pax1P09084 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pax1P09084 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pax1P09084 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pax1P09084 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pax1P09084 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pax1P09084 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pax1P09084 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pax1P09084 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.23■□□□□ 0.67
Pax1P09084 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pax1P09084 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pax1P09084 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pax1P09084 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.22■□□□□ 0.67
Pax1P09084 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Pax1P09084 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pax1P09084 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pax1P09084 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pax1P09084 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pax1P09084 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pax1P09084 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pax1P09084 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pax1P09084 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pax1P09084 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pax1P09084 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pax1P09084 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pax1P09084 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pax1P09084 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pax1P09084 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pax1P09084 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pax1P09084 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pax1P09084 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pax1P09084 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pax1P09084 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pax1P09084 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pax1P09084 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pax1P09084 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pax1P09084 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pax1P09084 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pax1P09084 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pax1P09084 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pax1P09084 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pax1P09084 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pax1P09084 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.16■□□□□ 0.66
Pax1P09084 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pax1P09084 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.15■□□□□ 0.66
Pax1P09084 Gm16148-201ENSMUST00000119653 893 ntBASIC19.15■□□□□ 0.66
Pax1P09084 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pax1P09084 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Pax1P09084 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pax1P09084 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pax1P09084 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pax1P09084 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pax1P09084 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Pax1P09084 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pax1P09084 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pax1P09084 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pax1P09084 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pax1P09084 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pax1P09084 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pax1P09084 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pax1P09084 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pax1P09084 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.1■□□□□ 0.65
Pax1P09084 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Pax1P09084 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Pax1P09084 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pax1P09084 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pax1P09084 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pax1P09084 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pax1P09084 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pax1P09084 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pax1P09084 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pax1P09084 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 194.9 ms