Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
P06344 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
P06344 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
P06344 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
P06344 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
P06344 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
P06344 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.42■■□□□ 1.02
P06344 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
P06344 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
P06344 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.42■■□□□ 1.02
P06344 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
P06344 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.41■■□□□ 1.02
P06344 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.41■■□□□ 1.02
P06344 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
P06344 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
P06344 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
P06344 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
P06344 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
P06344 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
P06344 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
P06344 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
P06344 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
P06344 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
P06344 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
P06344 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
P06344 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
P06344 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
P06344 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
P06344 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
P06344 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
P06344 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
P06344 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
P06344 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
P06344 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
P06344 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
P06344 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.32■■□□□ 1
P06344 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.32■■□□□ 1
P06344 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.32■■□□□ 1
P06344 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.31■■□□□ 1
P06344 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.31■■□□□ 1
P06344 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.31■■□□□ 1
P06344 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
P06344 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
P06344 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.3■■□□□ 1
P06344 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.29■■□□□ 1
P06344 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.29■■□□□ 1
P06344 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.29■■□□□ 1
P06344 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.29■■□□□ 1
P06344 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
P06344 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
P06344 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
P06344 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
P06344 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
P06344 Gm30023-201ENSMUST00000197970 889 ntBASIC21.26■□□□□ 0.99
P06344 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
P06344 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
P06344 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
P06344 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.24■□□□□ 0.99
P06344 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
P06344 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.24■□□□□ 0.99
P06344 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
P06344 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.23■□□□□ 0.99
P06344 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
P06344 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
P06344 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
P06344 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.22■□□□□ 0.99
P06344 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
P06344 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
P06344 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
P06344 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
P06344 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.21■□□□□ 0.99
P06344 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.21■□□□□ 0.99
P06344 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
P06344 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.2■□□□□ 0.99
P06344 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
P06344 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.2■□□□□ 0.98
P06344 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
P06344 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
P06344 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
P06344 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
P06344 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P06344 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P06344 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
P06344 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
P06344 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
P06344 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
P06344 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
P06344 Gm7432-201ENSMUST00000210343 879 ntBASIC21.16■□□□□ 0.98
P06344 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
P06344 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
P06344 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
P06344 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
P06344 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
P06344 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.14■□□□□ 0.97
P06344 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
P06344 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
P06344 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
P06344 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.12■□□□□ 0.97
P06344 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
P06344 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms