Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
P06344 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
P06344 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
P06344 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
P06344 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
P06344 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
P06344 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.42■■□□□ 1.02
P06344 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
P06344 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
P06344 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.42■■□□□ 1.02
P06344 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
P06344 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.41■■□□□ 1.02
P06344 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.41■■□□□ 1.02
P06344 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
P06344 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
P06344 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
P06344 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
P06344 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
P06344 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
P06344 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
P06344 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
P06344 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
P06344 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
P06344 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
P06344 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
P06344 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
P06344 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
P06344 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
P06344 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
P06344 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
P06344 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
P06344 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
P06344 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
P06344 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
P06344 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
P06344 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.32■■□□□ 1
P06344 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.32■■□□□ 1
P06344 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.32■■□□□ 1
P06344 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.31■■□□□ 1
P06344 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.31■■□□□ 1
P06344 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.31■■□□□ 1
P06344 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
P06344 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
P06344 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.3■■□□□ 1
P06344 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.29■■□□□ 1
P06344 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.29■■□□□ 1
P06344 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.29■■□□□ 1
P06344 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.29■■□□□ 1
P06344 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
P06344 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
P06344 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
P06344 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
P06344 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
P06344 Gm30023-201ENSMUST00000197970 889 ntBASIC21.26■□□□□ 0.99
P06344 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
P06344 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
P06344 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
P06344 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.24■□□□□ 0.99
P06344 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
P06344 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.24■□□□□ 0.99
P06344 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
P06344 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.23■□□□□ 0.99
P06344 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
P06344 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
P06344 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
P06344 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.22■□□□□ 0.99
P06344 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
P06344 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
P06344 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
P06344 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
P06344 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.21■□□□□ 0.99
P06344 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.21■□□□□ 0.99
P06344 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
P06344 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.2■□□□□ 0.99
P06344 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
P06344 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.2■□□□□ 0.98
P06344 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
P06344 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
P06344 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
P06344 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
P06344 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P06344 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P06344 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
P06344 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
P06344 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
P06344 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
P06344 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
P06344 Gm7432-201ENSMUST00000210343 879 ntBASIC21.16■□□□□ 0.98
P06344 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
P06344 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
P06344 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
P06344 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
P06344 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
P06344 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.14■□□□□ 0.97
P06344 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
P06344 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
P06344 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
P06344 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.12■□□□□ 0.97
P06344 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
P06344 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms