Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Nr1i3O35627 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Nr1i3O35627 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Nr1i3O35627 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Nr1i3O35627 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Nr1i3O35627 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Nr1i3O35627 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
Nr1i3O35627 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Nr1i3O35627 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.84■■□□□ 1.73
Nr1i3O35627 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Nr1i3O35627 Gm9397-201ENSMUST00000200125 605 ntBASIC25.83■■□□□ 1.73
Nr1i3O35627 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.72
Nr1i3O35627 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Nr1i3O35627 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Nr1i3O35627 Gm24970-201ENSMUST00000175582 82 ntBASIC25.82■■□□□ 1.72
Nr1i3O35627 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.82■■□□□ 1.72
Nr1i3O35627 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.82■■□□□ 1.72
Nr1i3O35627 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Nr1i3O35627 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Nr1i3O35627 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Nr1i3O35627 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.81■■□□□ 1.72
Nr1i3O35627 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Nr1i3O35627 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.81■■□□□ 1.72
Nr1i3O35627 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Nr1i3O35627 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Nr1i3O35627 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.8■■□□□ 1.72
Nr1i3O35627 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Nr1i3O35627 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.79■■□□□ 1.72
Nr1i3O35627 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Nr1i3O35627 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Nr1i3O35627 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Nr1i3O35627 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
Nr1i3O35627 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.76■■□□□ 1.71
Nr1i3O35627 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
Nr1i3O35627 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
Nr1i3O35627 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.75■■□□□ 1.71
Nr1i3O35627 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Nr1i3O35627 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.74■■□□□ 1.71
Nr1i3O35627 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
Nr1i3O35627 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.73■■□□□ 1.71
Nr1i3O35627 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.73■■□□□ 1.71
Nr1i3O35627 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.73■■□□□ 1.71
Nr1i3O35627 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Nr1i3O35627 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.72■■□□□ 1.71
Nr1i3O35627 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.72■■□□□ 1.71
Nr1i3O35627 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Nr1i3O35627 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Nr1i3O35627 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Nr1i3O35627 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Nr1i3O35627 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.69■■□□□ 1.7
Nr1i3O35627 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Nr1i3O35627 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Nr1i3O35627 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.67■■□□□ 1.7
Nr1i3O35627 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Nr1i3O35627 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.67■■□□□ 1.7
Nr1i3O35627 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Nr1i3O35627 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Nr1i3O35627 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Nr1i3O35627 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Nr1i3O35627 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Nr1i3O35627 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Nr1i3O35627 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Nr1i3O35627 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Nr1i3O35627 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Nr1i3O35627 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Nr1i3O35627 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Nr1i3O35627 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.59■■□□□ 1.69
Nr1i3O35627 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Nr1i3O35627 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Nr1i3O35627 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Nr1i3O35627 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Nr1i3O35627 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Nr1i3O35627 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Nr1i3O35627 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Nr1i3O35627 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Nr1i3O35627 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Nr1i3O35627 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Nr1i3O35627 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Nr1i3O35627 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Nr1i3O35627 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Nr1i3O35627 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Nr1i3O35627 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Nr1i3O35627 Gm45855-201ENSMUST00000212546 880 ntBASIC25.54■■□□□ 1.68
Nr1i3O35627 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.54■■□□□ 1.68
Nr1i3O35627 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.54■■□□□ 1.68
Nr1i3O35627 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Nr1i3O35627 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.52■■□□□ 1.68
Nr1i3O35627 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Nr1i3O35627 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Nr1i3O35627 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Nr1i3O35627 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Nr1i3O35627 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Nr1i3O35627 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
Nr1i3O35627 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Nr1i3O35627 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Nr1i3O35627 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.49■■□□□ 1.67
Nr1i3O35627 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Nr1i3O35627 Gm30023-201ENSMUST00000197970 889 ntBASIC25.48■■□□□ 1.67
Nr1i3O35627 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Nr1i3O35627 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms