Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
OtpO09113 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
OtpO09113 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
OtpO09113 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
OtpO09113 Gm24970-201ENSMUST00000175582 82 ntBASIC21.19■□□□□ 0.98
OtpO09113 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
OtpO09113 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
OtpO09113 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
OtpO09113 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
OtpO09113 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
OtpO09113 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.17■□□□□ 0.98
OtpO09113 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.17■□□□□ 0.98
OtpO09113 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
OtpO09113 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
OtpO09113 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
OtpO09113 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
OtpO09113 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
OtpO09113 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
OtpO09113 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
OtpO09113 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
OtpO09113 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
OtpO09113 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
OtpO09113 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.14■□□□□ 0.97
OtpO09113 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
OtpO09113 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
OtpO09113 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
OtpO09113 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
OtpO09113 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
OtpO09113 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
OtpO09113 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
OtpO09113 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
OtpO09113 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
OtpO09113 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
OtpO09113 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
OtpO09113 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
OtpO09113 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.1■□□□□ 0.97
OtpO09113 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
OtpO09113 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
OtpO09113 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
OtpO09113 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
OtpO09113 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
OtpO09113 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
OtpO09113 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
OtpO09113 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
OtpO09113 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.07■□□□□ 0.96
OtpO09113 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
OtpO09113 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
OtpO09113 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.06■□□□□ 0.96
OtpO09113 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
OtpO09113 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
OtpO09113 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
OtpO09113 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
OtpO09113 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
OtpO09113 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
OtpO09113 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
OtpO09113 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
OtpO09113 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
OtpO09113 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.04■□□□□ 0.96
OtpO09113 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
OtpO09113 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
OtpO09113 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
OtpO09113 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.03■□□□□ 0.96
OtpO09113 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
OtpO09113 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
OtpO09113 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
OtpO09113 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
OtpO09113 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
OtpO09113 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
OtpO09113 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
OtpO09113 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.01■□□□□ 0.95
OtpO09113 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
OtpO09113 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21■□□□□ 0.95
OtpO09113 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21■□□□□ 0.95
OtpO09113 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21■□□□□ 0.95
OtpO09113 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
OtpO09113 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
OtpO09113 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
OtpO09113 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
OtpO09113 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
OtpO09113 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
OtpO09113 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
OtpO09113 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.97■□□□□ 0.95
OtpO09113 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
OtpO09113 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
OtpO09113 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.97■□□□□ 0.95
OtpO09113 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
OtpO09113 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
OtpO09113 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
OtpO09113 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
OtpO09113 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
OtpO09113 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
OtpO09113 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
OtpO09113 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
OtpO09113 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
OtpO09113 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
OtpO09113 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
OtpO09113 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
OtpO09113 Gm30023-201ENSMUST00000197970 889 ntBASIC20.94■□□□□ 0.94
OtpO09113 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
OtpO09113 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms