Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Raet1aO08602 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Raet1aO08602 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Raet1aO08602 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Raet1aO08602 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Raet1aO08602 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.17■□□□□ 0.98
Raet1aO08602 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Raet1aO08602 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Raet1aO08602 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Raet1aO08602 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Raet1aO08602 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Raet1aO08602 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Raet1aO08602 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Raet1aO08602 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Raet1aO08602 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Raet1aO08602 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Raet1aO08602 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.14■□□□□ 0.97
Raet1aO08602 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Raet1aO08602 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Raet1aO08602 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Raet1aO08602 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Raet1aO08602 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Raet1aO08602 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Raet1aO08602 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Raet1aO08602 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Raet1aO08602 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Raet1aO08602 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Raet1aO08602 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Raet1aO08602 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Raet1aO08602 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.09■□□□□ 0.97
Raet1aO08602 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Raet1aO08602 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Raet1aO08602 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Raet1aO08602 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Raet1aO08602 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Raet1aO08602 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Raet1aO08602 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.06■□□□□ 0.96
Raet1aO08602 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Raet1aO08602 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Raet1aO08602 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Raet1aO08602 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Raet1aO08602 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Raet1aO08602 Gm30023-201ENSMUST00000197970 889 ntBASIC21.05■□□□□ 0.96
Raet1aO08602 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Raet1aO08602 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Raet1aO08602 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Raet1aO08602 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.04■□□□□ 0.96
Raet1aO08602 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Raet1aO08602 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Raet1aO08602 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Raet1aO08602 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.02■□□□□ 0.96
Raet1aO08602 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Raet1aO08602 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Raet1aO08602 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Raet1aO08602 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Raet1aO08602 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Raet1aO08602 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Raet1aO08602 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Raet1aO08602 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Raet1aO08602 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Raet1aO08602 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Raet1aO08602 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Raet1aO08602 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21■□□□□ 0.95
Raet1aO08602 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21■□□□□ 0.95
Raet1aO08602 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21■□□□□ 0.95
Raet1aO08602 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21■□□□□ 0.95
Raet1aO08602 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21■□□□□ 0.95
Raet1aO08602 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Raet1aO08602 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Raet1aO08602 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21■□□□□ 0.95
Raet1aO08602 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Raet1aO08602 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Raet1aO08602 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Raet1aO08602 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.99■□□□□ 0.95
Raet1aO08602 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Raet1aO08602 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Raet1aO08602 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.98■□□□□ 0.95
Raet1aO08602 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Raet1aO08602 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Raet1aO08602 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.97■□□□□ 0.95
Raet1aO08602 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Raet1aO08602 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Raet1aO08602 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Raet1aO08602 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Raet1aO08602 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Raet1aO08602 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Raet1aO08602 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.95■□□□□ 0.94
Raet1aO08602 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Raet1aO08602 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Raet1aO08602 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Raet1aO08602 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Raet1aO08602 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Raet1aO08602 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Raet1aO08602 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Raet1aO08602 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.94■□□□□ 0.94
Raet1aO08602 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Raet1aO08602 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Raet1aO08602 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Raet1aO08602 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Raet1aO08602 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms