Protein–RNA interactions for Protein: E9Q9P8

Rdh16f1, RDH16 family member 1, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh16f1E9Q9P8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rdh16f1E9Q9P8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Rdh16f1E9Q9P8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rdh16f1E9Q9P8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rdh16f1E9Q9P8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rdh16f1E9Q9P8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rdh16f1E9Q9P8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rdh16f1E9Q9P8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rdh16f1E9Q9P8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rdh16f1E9Q9P8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rdh16f1E9Q9P8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rdh16f1E9Q9P8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rdh16f1E9Q9P8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rdh16f1E9Q9P8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rdh16f1E9Q9P8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh16f1E9Q9P8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.15■□□□□ 0.98
Rdh16f1E9Q9P8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh16f1E9Q9P8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.15■□□□□ 0.98
Rdh16f1E9Q9P8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rdh16f1E9Q9P8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rdh16f1E9Q9P8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rdh16f1E9Q9P8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rdh16f1E9Q9P8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rdh16f1E9Q9P8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rdh16f1E9Q9P8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rdh16f1E9Q9P8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rdh16f1E9Q9P8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rdh16f1E9Q9P8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rdh16f1E9Q9P8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rdh16f1E9Q9P8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rdh16f1E9Q9P8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rdh16f1E9Q9P8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rdh16f1E9Q9P8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rdh16f1E9Q9P8 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.09■□□□□ 0.97
Rdh16f1E9Q9P8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rdh16f1E9Q9P8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rdh16f1E9Q9P8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Rdh16f1E9Q9P8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Rdh16f1E9Q9P8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.08■□□□□ 0.96
Rdh16f1E9Q9P8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rdh16f1E9Q9P8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rdh16f1E9Q9P8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Rdh16f1E9Q9P8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.07■□□□□ 0.96
Rdh16f1E9Q9P8 Gm30023-201ENSMUST00000197970 889 ntBASIC21.07■□□□□ 0.96
Rdh16f1E9Q9P8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.06■□□□□ 0.96
Rdh16f1E9Q9P8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rdh16f1E9Q9P8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.06■□□□□ 0.96
Rdh16f1E9Q9P8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.06■□□□□ 0.96
Rdh16f1E9Q9P8 Nkain2-201ENSMUST00000092602 558 ntBASIC21.05■□□□□ 0.96
Rdh16f1E9Q9P8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Rdh16f1E9Q9P8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rdh16f1E9Q9P8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Rdh16f1E9Q9P8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rdh16f1E9Q9P8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rdh16f1E9Q9P8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rdh16f1E9Q9P8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rdh16f1E9Q9P8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rdh16f1E9Q9P8 Gm6821-201ENSMUST00000107540 542 ntBASIC21.02■□□□□ 0.96
Rdh16f1E9Q9P8 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.02■□□□□ 0.96
Rdh16f1E9Q9P8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
Rdh16f1E9Q9P8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.01■□□□□ 0.95
Rdh16f1E9Q9P8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Rdh16f1E9Q9P8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rdh16f1E9Q9P8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rdh16f1E9Q9P8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rdh16f1E9Q9P8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rdh16f1E9Q9P8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Rdh16f1E9Q9P8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rdh16f1E9Q9P8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rdh16f1E9Q9P8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Rdh16f1E9Q9P8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rdh16f1E9Q9P8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rdh16f1E9Q9P8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rdh16f1E9Q9P8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rdh16f1E9Q9P8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rdh16f1E9Q9P8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Rdh16f1E9Q9P8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rdh16f1E9Q9P8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rdh16f1E9Q9P8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Rdh16f1E9Q9P8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rdh16f1E9Q9P8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rdh16f1E9Q9P8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rdh16f1E9Q9P8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Rdh16f1E9Q9P8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rdh16f1E9Q9P8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rdh16f1E9Q9P8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Rdh16f1E9Q9P8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rdh16f1E9Q9P8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rdh16f1E9Q9P8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rdh16f1E9Q9P8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.93■□□□□ 0.94
Rdh16f1E9Q9P8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rdh16f1E9Q9P8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rdh16f1E9Q9P8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rdh16f1E9Q9P8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.9■□□□□ 0.94
Rdh16f1E9Q9P8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.9■□□□□ 0.94
Rdh16f1E9Q9P8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rdh16f1E9Q9P8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rdh16f1E9Q9P8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rdh16f1E9Q9P8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.89■□□□□ 0.93
Rdh16f1E9Q9P8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms