Protein–RNA interactions for Protein: B1AUS7

Ssxa1, Protein SSXA1, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxa1B1AUS7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
Ssxa1B1AUS7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ssxa1B1AUS7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Ssxa1B1AUS7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.86■■□□□ 1.25
Ssxa1B1AUS7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Ssxa1B1AUS7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.86■■□□□ 1.25
Ssxa1B1AUS7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ssxa1B1AUS7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ssxa1B1AUS7 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.85■■□□□ 1.25
Ssxa1B1AUS7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ssxa1B1AUS7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.84■■□□□ 1.25
Ssxa1B1AUS7 Nkain2-201ENSMUST00000092602 558 ntBASIC22.84■■□□□ 1.25
Ssxa1B1AUS7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.24
Ssxa1B1AUS7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Ssxa1B1AUS7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.82■■□□□ 1.24
Ssxa1B1AUS7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ssxa1B1AUS7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ssxa1B1AUS7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.81■■□□□ 1.24
Ssxa1B1AUS7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Ssxa1B1AUS7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Ssxa1B1AUS7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ssxa1B1AUS7 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.8■■□□□ 1.24
Ssxa1B1AUS7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
Ssxa1B1AUS7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ssxa1B1AUS7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ssxa1B1AUS7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ssxa1B1AUS7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ssxa1B1AUS7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ssxa1B1AUS7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Ssxa1B1AUS7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ssxa1B1AUS7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ssxa1B1AUS7 Gm30023-201ENSMUST00000197970 889 ntBASIC22.78■■□□□ 1.24
Ssxa1B1AUS7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ssxa1B1AUS7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ssxa1B1AUS7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.76■■□□□ 1.23
Ssxa1B1AUS7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ssxa1B1AUS7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ssxa1B1AUS7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ssxa1B1AUS7 Gm6821-201ENSMUST00000107540 542 ntBASIC22.75■■□□□ 1.23
Ssxa1B1AUS7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.75■■□□□ 1.23
Ssxa1B1AUS7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ssxa1B1AUS7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Ssxa1B1AUS7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ssxa1B1AUS7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Ssxa1B1AUS7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
Ssxa1B1AUS7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Ssxa1B1AUS7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Ssxa1B1AUS7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ssxa1B1AUS7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.7■■□□□ 1.22
Ssxa1B1AUS7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ssxa1B1AUS7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Ssxa1B1AUS7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Ssxa1B1AUS7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ssxa1B1AUS7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ssxa1B1AUS7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ssxa1B1AUS7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ssxa1B1AUS7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ssxa1B1AUS7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ssxa1B1AUS7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ssxa1B1AUS7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ssxa1B1AUS7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ssxa1B1AUS7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ssxa1B1AUS7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ssxa1B1AUS7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
Ssxa1B1AUS7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Ssxa1B1AUS7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ssxa1B1AUS7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ssxa1B1AUS7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ssxa1B1AUS7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ssxa1B1AUS7 Gm8503-201ENSMUST00000118131 455 ntBASIC22.65■■□□□ 1.22
Ssxa1B1AUS7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ssxa1B1AUS7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Ssxa1B1AUS7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ssxa1B1AUS7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.64■■□□□ 1.21
Ssxa1B1AUS7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ssxa1B1AUS7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.62■■□□□ 1.21
Ssxa1B1AUS7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.62■■□□□ 1.21
Ssxa1B1AUS7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ssxa1B1AUS7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ssxa1B1AUS7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.61■■□□□ 1.21
Ssxa1B1AUS7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ssxa1B1AUS7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ssxa1B1AUS7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ssxa1B1AUS7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.61■■□□□ 1.21
Ssxa1B1AUS7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Ssxa1B1AUS7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.6■■□□□ 1.21
Ssxa1B1AUS7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.59■■□□□ 1.21
Ssxa1B1AUS7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.59■■□□□ 1.21
Ssxa1B1AUS7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.59■■□□□ 1.21
Ssxa1B1AUS7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ssxa1B1AUS7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.58■■□□□ 1.21
Ssxa1B1AUS7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ssxa1B1AUS7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ssxa1B1AUS7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ssxa1B1AUS7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.57■■□□□ 1.2
Ssxa1B1AUS7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ssxa1B1AUS7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ssxa1B1AUS7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.56■■□□□ 1.2
Ssxa1B1AUS7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Ssxa1B1AUS7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms