Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.91■■□□□ 1.42
Chd3B1AR17 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.9■■□□□ 1.42
Chd3B1AR17 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Chd3B1AR17 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Chd3B1AR17 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Chd3B1AR17 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Chd3B1AR17 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Chd3B1AR17 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Chd3B1AR17 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Chd3B1AR17 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.87■■□□□ 1.41
Chd3B1AR17 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Chd3B1AR17 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.85■■□□□ 1.41
Chd3B1AR17 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Chd3B1AR17 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Chd3B1AR17 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Chd3B1AR17 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chd3B1AR17 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chd3B1AR17 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Chd3B1AR17 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.83■■□□□ 1.41
Chd3B1AR17 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Chd3B1AR17 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Chd3B1AR17 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Chd3B1AR17 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Chd3B1AR17 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Chd3B1AR17 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Chd3B1AR17 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Chd3B1AR17 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chd3B1AR17 Gm11599-201ENSMUST00000118720 878 ntBASIC23.79■■□□□ 1.4
Chd3B1AR17 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.79■■□□□ 1.4
Chd3B1AR17 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chd3B1AR17 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Chd3B1AR17 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
Chd3B1AR17 Amer2-203ENSMUST00000225247 2662 ntBASIC23.77■■□□□ 1.4
Chd3B1AR17 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
Chd3B1AR17 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
Chd3B1AR17 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.77■■□□□ 1.4
Chd3B1AR17 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Chd3B1AR17 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Chd3B1AR17 Gm30023-201ENSMUST00000197970 889 ntBASIC23.76■■□□□ 1.39
Chd3B1AR17 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Chd3B1AR17 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chd3B1AR17 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd3B1AR17 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd3B1AR17 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chd3B1AR17 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Chd3B1AR17 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Chd3B1AR17 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Chd3B1AR17 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Chd3B1AR17 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Chd3B1AR17 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Chd3B1AR17 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Chd3B1AR17 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Chd3B1AR17 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.68■■□□□ 1.38
Chd3B1AR17 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.68■■□□□ 1.38
Chd3B1AR17 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Chd3B1AR17 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.67■■□□□ 1.38
Chd3B1AR17 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Chd3B1AR17 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Chd3B1AR17 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Chd3B1AR17 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Chd3B1AR17 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.66■■□□□ 1.38
Chd3B1AR17 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.65■■□□□ 1.38
Chd3B1AR17 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Chd3B1AR17 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Chd3B1AR17 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.63■■□□□ 1.37
Chd3B1AR17 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Chd3B1AR17 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.61■■□□□ 1.37
Chd3B1AR17 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Chd3B1AR17 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Chd3B1AR17 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Chd3B1AR17 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Chd3B1AR17 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Chd3B1AR17 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Chd3B1AR17 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.59■■□□□ 1.37
Chd3B1AR17 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Chd3B1AR17 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Chd3B1AR17 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
Chd3B1AR17 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.36
Chd3B1AR17 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Chd3B1AR17 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Chd3B1AR17 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Chd3B1AR17 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Chd3B1AR17 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Chd3B1AR17 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.56■■□□□ 1.36
Chd3B1AR17 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Chd3B1AR17 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
Chd3B1AR17 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
Chd3B1AR17 Particl-201ENSMUST00000205370 1560 ntBASIC23.55■■□□□ 1.36
Chd3B1AR17 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Chd3B1AR17 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Chd3B1AR17 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Chd3B1AR17 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Chd3B1AR17 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Chd3B1AR17 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Chd3B1AR17 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
Chd3B1AR17 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Chd3B1AR17 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Chd3B1AR17 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.52■■□□□ 1.35
Chd3B1AR17 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Chd3B1AR17 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 143 ms