Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav12d-1A0N8R0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav12d-1A0N8R0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav12d-1A0N8R0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav12d-1A0N8R0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav12d-1A0N8R0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trav12d-1A0N8R0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav12d-1A0N8R0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trav12d-1A0N8R0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav12d-1A0N8R0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav12d-1A0N8R0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav12d-1A0N8R0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav12d-1A0N8R0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav12d-1A0N8R0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav12d-1A0N8R0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trav12d-1A0N8R0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav12d-1A0N8R0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav12d-1A0N8R0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.16■□□□□ 0.66
Trav12d-1A0N8R0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Trav12d-1A0N8R0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav12d-1A0N8R0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav12d-1A0N8R0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav12d-1A0N8R0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav12d-1A0N8R0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12d-1A0N8R0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12d-1A0N8R0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12d-1A0N8R0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.15■□□□□ 0.66
Trav12d-1A0N8R0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12d-1A0N8R0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12d-1A0N8R0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12d-1A0N8R0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12d-1A0N8R0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav12d-1A0N8R0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav12d-1A0N8R0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav12d-1A0N8R0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trav12d-1A0N8R0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trav12d-1A0N8R0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav12d-1A0N8R0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav12d-1A0N8R0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav12d-1A0N8R0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav12d-1A0N8R0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav12d-1A0N8R0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav12d-1A0N8R0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trav12d-1A0N8R0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav12d-1A0N8R0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav12d-1A0N8R0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav12d-1A0N8R0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav12d-1A0N8R0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav12d-1A0N8R0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav12d-1A0N8R0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav12d-1A0N8R0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav12d-1A0N8R0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.08■□□□□ 0.64
Trav12d-1A0N8R0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav12d-1A0N8R0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trav12d-1A0N8R0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav12d-1A0N8R0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.07■□□□□ 0.64
Trav12d-1A0N8R0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav12d-1A0N8R0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trav12d-1A0N8R0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav12d-1A0N8R0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trav12d-1A0N8R0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav12d-1A0N8R0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav12d-1A0N8R0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav12d-1A0N8R0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav12d-1A0N8R0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav12d-1A0N8R0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.04■□□□□ 0.64
Trav12d-1A0N8R0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav12d-1A0N8R0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav12d-1A0N8R0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav12d-1A0N8R0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trav12d-1A0N8R0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav12d-1A0N8R0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav12d-1A0N8R0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav12d-1A0N8R0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trav12d-1A0N8R0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Trav12d-1A0N8R0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav12d-1A0N8R0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav12d-1A0N8R0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav12d-1A0N8R0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav12d-1A0N8R0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav12d-1A0N8R0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav12d-1A0N8R0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trav12d-1A0N8R0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.98■□□□□ 0.63
Trav12d-1A0N8R0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav12d-1A0N8R0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav12d-1A0N8R0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav12d-1A0N8R0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trav12d-1A0N8R0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trav12d-1A0N8R0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav12d-1A0N8R0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav12d-1A0N8R0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav12d-1A0N8R0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav12d-1A0N8R0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav12d-1A0N8R0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav12d-1A0N8R0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Trav12d-1A0N8R0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav12d-1A0N8R0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav12d-1A0N8R0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav12d-1A0N8R0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav12d-1A0N8R0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms