Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.35■■□□□ 1.49
Gm3854A0A1B0GSS6 Gm6311-201ENSMUST00000073790 878 ntBASIC24.34■■□□□ 1.49
Gm3854A0A1B0GSS6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Gm3854A0A1B0GSS6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Gm3854A0A1B0GSS6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Gm3854A0A1B0GSS6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.31■■□□□ 1.48
Gm3854A0A1B0GSS6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Gm3854A0A1B0GSS6 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.3■■□□□ 1.48
Gm3854A0A1B0GSS6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.3■■□□□ 1.48
Gm3854A0A1B0GSS6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Gm3854A0A1B0GSS6 Particl-201ENSMUST00000205370 1560 ntBASIC24.29■■□□□ 1.48
Gm3854A0A1B0GSS6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Gm3854A0A1B0GSS6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Gm3854A0A1B0GSS6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Gm3854A0A1B0GSS6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Gm3854A0A1B0GSS6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Gm3854A0A1B0GSS6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Gm3854A0A1B0GSS6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
Gm3854A0A1B0GSS6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.26■■□□□ 1.47
Gm3854A0A1B0GSS6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Gm3854A0A1B0GSS6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Gm3854A0A1B0GSS6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Gm3854A0A1B0GSS6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Gm3854A0A1B0GSS6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Gm3854A0A1B0GSS6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Gm3854A0A1B0GSS6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.22■■□□□ 1.47
Gm3854A0A1B0GSS6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.21■■□□□ 1.47
Gm3854A0A1B0GSS6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.21■■□□□ 1.47
Gm3854A0A1B0GSS6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.21■■□□□ 1.47
Gm3854A0A1B0GSS6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Gm3854A0A1B0GSS6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Gm3854A0A1B0GSS6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Gm3854A0A1B0GSS6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Gm3854A0A1B0GSS6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Gm3854A0A1B0GSS6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Gm3854A0A1B0GSS6 Cap2-205ENSMUST00000225824 1634 ntBASIC24.19■■□□□ 1.46
Gm3854A0A1B0GSS6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Gm3854A0A1B0GSS6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Gm3854A0A1B0GSS6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Gm3854A0A1B0GSS6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Gm3854A0A1B0GSS6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.17■■□□□ 1.46
Gm3854A0A1B0GSS6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Gm3854A0A1B0GSS6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
Gm3854A0A1B0GSS6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Gm3854A0A1B0GSS6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.16■■□□□ 1.46
Gm3854A0A1B0GSS6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Gm3854A0A1B0GSS6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Gm3854A0A1B0GSS6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
Gm3854A0A1B0GSS6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Gm3854A0A1B0GSS6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Gm3854A0A1B0GSS6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Gm3854A0A1B0GSS6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Gm3854A0A1B0GSS6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Gm3854A0A1B0GSS6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Gm3854A0A1B0GSS6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Gm3854A0A1B0GSS6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Gm3854A0A1B0GSS6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.11■■□□□ 1.45
Gm3854A0A1B0GSS6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Gm3854A0A1B0GSS6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Gm3854A0A1B0GSS6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
Gm3854A0A1B0GSS6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Gm3854A0A1B0GSS6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Gm3854A0A1B0GSS6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Gm3854A0A1B0GSS6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Gm3854A0A1B0GSS6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Gm3854A0A1B0GSS6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
Gm3854A0A1B0GSS6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Gm3854A0A1B0GSS6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Gm3854A0A1B0GSS6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.04■■□□□ 1.44
Gm3854A0A1B0GSS6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Gm3854A0A1B0GSS6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Gm3854A0A1B0GSS6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Gm3854A0A1B0GSS6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Gm3854A0A1B0GSS6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Gm3854A0A1B0GSS6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Gm3854A0A1B0GSS6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.02■■□□□ 1.44
Gm3854A0A1B0GSS6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Gm3854A0A1B0GSS6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Gm3854A0A1B0GSS6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Gm3854A0A1B0GSS6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.01■■□□□ 1.43
Gm3854A0A1B0GSS6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Gm3854A0A1B0GSS6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Gm3854A0A1B0GSS6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24■■□□□ 1.43
Gm3854A0A1B0GSS6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Gm3854A0A1B0GSS6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Gm3854A0A1B0GSS6 Scarna2-201ENSMUST00000157560 414 ntBASIC23.98■■□□□ 1.43
Gm3854A0A1B0GSS6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.98■■□□□ 1.43
Gm3854A0A1B0GSS6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Gm3854A0A1B0GSS6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Gm3854A0A1B0GSS6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Gm3854A0A1B0GSS6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.97■■□□□ 1.43
Gm3854A0A1B0GSS6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Gm3854A0A1B0GSS6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Gm3854A0A1B0GSS6 Gm4799-201ENSMUST00000095396 657 ntBASIC23.96■■□□□ 1.43
Gm3854A0A1B0GSS6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Gm3854A0A1B0GSS6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Gm3854A0A1B0GSS6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Gm3854A0A1B0GSS6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Gm3854A0A1B0GSS6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Gm3854A0A1B0GSS6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.94■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms