Protein–RNA interactions for Protein: A0A1B0GQY9

Lrrc29, Leucine rich repeat containing 29, isoform CRA_c, mousemouse

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc29A0A1B0GQY9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrc29A0A1B0GQY9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrc29A0A1B0GQY9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrc29A0A1B0GQY9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.58■□□□□ 0.89
Lrrc29A0A1B0GQY9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrc29A0A1B0GQY9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Lrrc29A0A1B0GQY9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrc29A0A1B0GQY9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Lrrc29A0A1B0GQY9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrc29A0A1B0GQY9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrc29A0A1B0GQY9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc29A0A1B0GQY9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrc29A0A1B0GQY9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Lrrc29A0A1B0GQY9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrc29A0A1B0GQY9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrc29A0A1B0GQY9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrrc29A0A1B0GQY9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrrc29A0A1B0GQY9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lrrc29A0A1B0GQY9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lrrc29A0A1B0GQY9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lrrc29A0A1B0GQY9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.52■□□□□ 0.88
Lrrc29A0A1B0GQY9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lrrc29A0A1B0GQY9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrc29A0A1B0GQY9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrc29A0A1B0GQY9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.51■□□□□ 0.87
Lrrc29A0A1B0GQY9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrc29A0A1B0GQY9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrc29A0A1B0GQY9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.49■□□□□ 0.87
Lrrc29A0A1B0GQY9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrc29A0A1B0GQY9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrc29A0A1B0GQY9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrc29A0A1B0GQY9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrc29A0A1B0GQY9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrc29A0A1B0GQY9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrrc29A0A1B0GQY9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Lrrc29A0A1B0GQY9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Lrrc29A0A1B0GQY9 Gm30023-201ENSMUST00000197970 889 ntBASIC20.47■□□□□ 0.87
Lrrc29A0A1B0GQY9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrrc29A0A1B0GQY9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrc29A0A1B0GQY9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.46■□□□□ 0.87
Lrrc29A0A1B0GQY9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.46■□□□□ 0.87
Lrrc29A0A1B0GQY9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Lrrc29A0A1B0GQY9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.45■□□□□ 0.86
Lrrc29A0A1B0GQY9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lrrc29A0A1B0GQY9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.44■□□□□ 0.86
Lrrc29A0A1B0GQY9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lrrc29A0A1B0GQY9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lrrc29A0A1B0GQY9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lrrc29A0A1B0GQY9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Lrrc29A0A1B0GQY9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lrrc29A0A1B0GQY9 Nkain2-201ENSMUST00000092602 558 ntBASIC20.42■□□□□ 0.86
Lrrc29A0A1B0GQY9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lrrc29A0A1B0GQY9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lrrc29A0A1B0GQY9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lrrc29A0A1B0GQY9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lrrc29A0A1B0GQY9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lrrc29A0A1B0GQY9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lrrc29A0A1B0GQY9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Lrrc29A0A1B0GQY9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Lrrc29A0A1B0GQY9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Lrrc29A0A1B0GQY9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Lrrc29A0A1B0GQY9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lrrc29A0A1B0GQY9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Lrrc29A0A1B0GQY9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lrrc29A0A1B0GQY9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
Lrrc29A0A1B0GQY9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lrrc29A0A1B0GQY9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lrrc29A0A1B0GQY9 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.39■□□□□ 0.85
Lrrc29A0A1B0GQY9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Lrrc29A0A1B0GQY9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lrrc29A0A1B0GQY9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Lrrc29A0A1B0GQY9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Lrrc29A0A1B0GQY9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.38■□□□□ 0.85
Lrrc29A0A1B0GQY9 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.38■□□□□ 0.85
Lrrc29A0A1B0GQY9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrrc29A0A1B0GQY9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrrc29A0A1B0GQY9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrrc29A0A1B0GQY9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrrc29A0A1B0GQY9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrrc29A0A1B0GQY9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lrrc29A0A1B0GQY9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrrc29A0A1B0GQY9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Lrrc29A0A1B0GQY9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrrc29A0A1B0GQY9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrc29A0A1B0GQY9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.34■□□□□ 0.85
Lrrc29A0A1B0GQY9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrc29A0A1B0GQY9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrrc29A0A1B0GQY9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Lrrc29A0A1B0GQY9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Lrrc29A0A1B0GQY9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.33■□□□□ 0.85
Lrrc29A0A1B0GQY9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.32■□□□□ 0.84
Lrrc29A0A1B0GQY9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lrrc29A0A1B0GQY9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.29■□□□□ 0.84
Lrrc29A0A1B0GQY9 Gm6821-201ENSMUST00000107540 542 ntBASIC20.29■□□□□ 0.84
Lrrc29A0A1B0GQY9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc29A0A1B0GQY9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc29A0A1B0GQY9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lrrc29A0A1B0GQY9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrrc29A0A1B0GQY9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.28■□□□□ 0.84
Lrrc29A0A1B0GQY9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms