Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.02■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.01■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.99■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.99■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.98■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp131-205ENSMUST00000223812 663 ntBASIC20.98■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav15d-2-dv6d-2A0A0G2JGQ7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.95■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.93■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.91■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.9■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Trav15d-2-dv6d-2A0A0G2JGQ7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav15d-2-dv6d-2A0A0G2JGQ7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav15d-2-dv6d-2A0A0G2JGQ7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav15d-2-dv6d-2A0A0G2JGQ7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav15d-2-dv6d-2A0A0G2JGQ7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav15d-2-dv6d-2A0A0G2JGQ7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.88■□□□□ 0.93
Trav15d-2-dv6d-2A0A0G2JGQ7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9397-201ENSMUST00000200125 605 ntBASIC20.87■□□□□ 0.93
Trav15d-2-dv6d-2A0A0G2JGQ7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav15d-2-dv6d-2A0A0G2JGQ7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm24970-201ENSMUST00000175582 82 ntBASIC20.85■□□□□ 0.93
Trav15d-2-dv6d-2A0A0G2JGQ7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.85■□□□□ 0.93
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trav15d-2-dv6d-2A0A0G2JGQ7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav15d-2-dv6d-2A0A0G2JGQ7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav15d-2-dv6d-2A0A0G2JGQ7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.84■□□□□ 0.93
Trav15d-2-dv6d-2A0A0G2JGQ7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.83■□□□□ 0.93
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.83■□□□□ 0.92
Trav15d-2-dv6d-2A0A0G2JGQ7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.81■□□□□ 0.92
Trav15d-2-dv6d-2A0A0G2JGQ7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.81■□□□□ 0.92
Trav15d-2-dv6d-2A0A0G2JGQ7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav15d-2-dv6d-2A0A0G2JGQ7 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.8■□□□□ 0.92
Trav15d-2-dv6d-2A0A0G2JGQ7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Trav15d-2-dv6d-2A0A0G2JGQ7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav15d-2-dv6d-2A0A0G2JGQ7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav15d-2-dv6d-2A0A0G2JGQ7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trav15d-2-dv6d-2A0A0G2JGQ7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.77■□□□□ 0.92
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav15d-2-dv6d-2A0A0G2JGQ7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trav15d-2-dv6d-2A0A0G2JGQ7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav15d-2-dv6d-2A0A0G2JGQ7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.76■□□□□ 0.91
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav15d-2-dv6d-2A0A0G2JGQ7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.75■□□□□ 0.91
Trav15d-2-dv6d-2A0A0G2JGQ7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav15d-2-dv6d-2A0A0G2JGQ7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trav15d-2-dv6d-2A0A0G2JGQ7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav15d-2-dv6d-2A0A0G2JGQ7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav15d-2-dv6d-2A0A0G2JGQ7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trav15d-2-dv6d-2A0A0G2JGQ7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav15d-2-dv6d-2A0A0G2JGQ7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav15d-2-dv6d-2A0A0G2JGQ7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav15d-2-dv6d-2A0A0G2JGQ7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms