Protein–RNA interactions for Protein: A0A0A6YW58

Ighv8-2, Immunoglobulin heavy variable V8-2 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv8-2A0A0A6YW58 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv8-2A0A0A6YW58 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.54■□□□□ 0.56
Ighv8-2A0A0A6YW58 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv8-2A0A0A6YW58 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv8-2A0A0A6YW58 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ighv8-2A0A0A6YW58 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Ighv8-2A0A0A6YW58 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv8-2A0A0A6YW58 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ighv8-2A0A0A6YW58 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ighv8-2A0A0A6YW58 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv8-2A0A0A6YW58 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv8-2A0A0A6YW58 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv8-2A0A0A6YW58 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.52■□□□□ 0.56
Ighv8-2A0A0A6YW58 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Ighv8-2A0A0A6YW58 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ighv8-2A0A0A6YW58 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ighv8-2A0A0A6YW58 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv8-2A0A0A6YW58 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv8-2A0A0A6YW58 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv8-2A0A0A6YW58 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv8-2A0A0A6YW58 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv8-2A0A0A6YW58 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv8-2A0A0A6YW58 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv8-2A0A0A6YW58 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv8-2A0A0A6YW58 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.49■□□□□ 0.55
Ighv8-2A0A0A6YW58 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv8-2A0A0A6YW58 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv8-2A0A0A6YW58 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv8-2A0A0A6YW58 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ighv8-2A0A0A6YW58 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv8-2A0A0A6YW58 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.48■□□□□ 0.55
Ighv8-2A0A0A6YW58 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv8-2A0A0A6YW58 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Ighv8-2A0A0A6YW58 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv8-2A0A0A6YW58 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv8-2A0A0A6YW58 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv8-2A0A0A6YW58 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ighv8-2A0A0A6YW58 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv8-2A0A0A6YW58 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.47■□□□□ 0.55
Ighv8-2A0A0A6YW58 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv8-2A0A0A6YW58 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv8-2A0A0A6YW58 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv8-2A0A0A6YW58 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv8-2A0A0A6YW58 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv8-2A0A0A6YW58 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv8-2A0A0A6YW58 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv8-2A0A0A6YW58 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.45■□□□□ 0.54
Ighv8-2A0A0A6YW58 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv8-2A0A0A6YW58 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv8-2A0A0A6YW58 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv8-2A0A0A6YW58 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv8-2A0A0A6YW58 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv8-2A0A0A6YW58 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ighv8-2A0A0A6YW58 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv8-2A0A0A6YW58 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv8-2A0A0A6YW58 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv8-2A0A0A6YW58 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.42■□□□□ 0.54
Ighv8-2A0A0A6YW58 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Ighv8-2A0A0A6YW58 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.42■□□□□ 0.54
Ighv8-2A0A0A6YW58 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ighv8-2A0A0A6YW58 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv8-2A0A0A6YW58 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Ighv8-2A0A0A6YW58 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv8-2A0A0A6YW58 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ighv8-2A0A0A6YW58 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv8-2A0A0A6YW58 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv8-2A0A0A6YW58 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.41■□□□□ 0.54
Ighv8-2A0A0A6YW58 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv8-2A0A0A6YW58 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv8-2A0A0A6YW58 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv8-2A0A0A6YW58 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv8-2A0A0A6YW58 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ighv8-2A0A0A6YW58 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv8-2A0A0A6YW58 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv8-2A0A0A6YW58 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv8-2A0A0A6YW58 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv8-2A0A0A6YW58 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv8-2A0A0A6YW58 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ighv8-2A0A0A6YW58 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv8-2A0A0A6YW58 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ighv8-2A0A0A6YW58 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv8-2A0A0A6YW58 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv8-2A0A0A6YW58 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv8-2A0A0A6YW58 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv8-2A0A0A6YW58 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv8-2A0A0A6YW58 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv8-2A0A0A6YW58 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv8-2A0A0A6YW58 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv8-2A0A0A6YW58 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ighv8-2A0A0A6YW58 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.34■□□□□ 0.53
Ighv8-2A0A0A6YW58 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv8-2A0A0A6YW58 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ighv8-2A0A0A6YW58 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ighv8-2A0A0A6YW58 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ighv8-2A0A0A6YW58 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv8-2A0A0A6YW58 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv8-2A0A0A6YW58 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv8-2A0A0A6YW58 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.33■□□□□ 0.52
Ighv8-2A0A0A6YW58 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv8-2A0A0A6YW58 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms