Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.94■□□□□ 0.46
Trav12d-3A0A075B6A4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav12d-3A0A075B6A4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav12d-3A0A075B6A4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.93■□□□□ 0.46
Trav12d-3A0A075B6A4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav12d-3A0A075B6A4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12d-3A0A075B6A4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trav12d-3A0A075B6A4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12d-3A0A075B6A4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12d-3A0A075B6A4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav12d-3A0A075B6A4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12d-3A0A075B6A4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12d-3A0A075B6A4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12d-3A0A075B6A4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12d-3A0A075B6A4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Trav12d-3A0A075B6A4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12d-3A0A075B6A4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12d-3A0A075B6A4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav12d-3A0A075B6A4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav12d-3A0A075B6A4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav12d-3A0A075B6A4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav12d-3A0A075B6A4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav12d-3A0A075B6A4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav12d-3A0A075B6A4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav12d-3A0A075B6A4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav12d-3A0A075B6A4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav12d-3A0A075B6A4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav12d-3A0A075B6A4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav12d-3A0A075B6A4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav12d-3A0A075B6A4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12d-3A0A075B6A4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12d-3A0A075B6A4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12d-3A0A075B6A4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12d-3A0A075B6A4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trav12d-3A0A075B6A4 Rab21-202ENSMUST00000218831 843 ntBASIC17.86■□□□□ 0.45
Trav12d-3A0A075B6A4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12d-3A0A075B6A4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trav12d-3A0A075B6A4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav12d-3A0A075B6A4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.84■□□□□ 0.45
Trav12d-3A0A075B6A4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav12d-3A0A075B6A4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav12d-3A0A075B6A4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav12d-3A0A075B6A4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav12d-3A0A075B6A4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trav12d-3A0A075B6A4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trav12d-3A0A075B6A4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav12d-3A0A075B6A4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav12d-3A0A075B6A4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav12d-3A0A075B6A4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trav12d-3A0A075B6A4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav12d-3A0A075B6A4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav12d-3A0A075B6A4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav12d-3A0A075B6A4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav12d-3A0A075B6A4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav12d-3A0A075B6A4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav12d-3A0A075B6A4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav12d-3A0A075B6A4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav12d-3A0A075B6A4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav12d-3A0A075B6A4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trav12d-3A0A075B6A4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav12d-3A0A075B6A4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav12d-3A0A075B6A4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav12d-3A0A075B6A4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav12d-3A0A075B6A4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav12d-3A0A075B6A4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav12d-3A0A075B6A4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav12d-3A0A075B6A4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.78■□□□□ 0.44
Trav12d-3A0A075B6A4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav12d-3A0A075B6A4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav12d-3A0A075B6A4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trav12d-3A0A075B6A4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav12d-3A0A075B6A4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav12d-3A0A075B6A4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav12d-3A0A075B6A4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav12d-3A0A075B6A4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav12d-3A0A075B6A4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav12d-3A0A075B6A4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav12d-3A0A075B6A4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trav12d-3A0A075B6A4 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.77■□□□□ 0.44
Trav12d-3A0A075B6A4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav12d-3A0A075B6A4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav12d-3A0A075B6A4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav12d-3A0A075B6A4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17.76■□□□□ 0.43
Trav12d-3A0A075B6A4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12d-3A0A075B6A4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12d-3A0A075B6A4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12d-3A0A075B6A4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12d-3A0A075B6A4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12d-3A0A075B6A4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12d-3A0A075B6A4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.74■□□□□ 0.43
Trav12d-3A0A075B6A4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12d-3A0A075B6A4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav12d-3A0A075B6A4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12d-3A0A075B6A4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trav12d-3A0A075B6A4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav12d-3A0A075B6A4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav12d-3A0A075B6A4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trav12d-3A0A075B6A4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav12d-3A0A075B6A4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav12d-3A0A075B6A4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms