Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19,76■□□□□ 0,75
Trav5-4A0A075B652 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19,76■□□□□ 0,75
Trav5-4A0A075B652 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19,75■□□□□ 0,75
Trav5-4A0A075B652 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19,75■□□□□ 0,75
Trav5-4A0A075B652 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19,75■□□□□ 0,75
Trav5-4A0A075B652 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19,75■□□□□ 0,75
Trav5-4A0A075B652 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19,75■□□□□ 0,75
Trav5-4A0A075B652 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19,75■□□□□ 0,75
Trav5-4A0A075B652 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19,74■□□□□ 0,75
Trav5-4A0A075B652 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19,73■□□□□ 0,75
Trav5-4A0A075B652 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19,73■□□□□ 0,75
Trav5-4A0A075B652 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19,73■□□□□ 0,75
Trav5-4A0A075B652 Gm24970-201ENSMUST00000175582 82 ntBASIC19,73■□□□□ 0,75
Trav5-4A0A075B652 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19,72■□□□□ 0,75
Trav5-4A0A075B652 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19,72■□□□□ 0,75
Trav5-4A0A075B652 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19,71■□□□□ 0,75
Trav5-4A0A075B652 Gm45855-201ENSMUST00000212546 880 ntBASIC19,71■□□□□ 0,75
Trav5-4A0A075B652 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19,71■□□□□ 0,75
Trav5-4A0A075B652 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19,71■□□□□ 0,75
Trav5-4A0A075B652 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19,71■□□□□ 0,75
Trav5-4A0A075B652 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19,7■□□□□ 0,74
Trav5-4A0A075B652 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19,7■□□□□ 0,74
Trav5-4A0A075B652 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19,7■□□□□ 0,74
Trav5-4A0A075B652 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19,7■□□□□ 0,74
Trav5-4A0A075B652 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19,7■□□□□ 0,74
Trav5-4A0A075B652 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19,69■□□□□ 0,74
Trav5-4A0A075B652 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19,68■□□□□ 0,74
Trav5-4A0A075B652 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19,68■□□□□ 0,74
Trav5-4A0A075B652 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19,68■□□□□ 0,74
Trav5-4A0A075B652 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19,68■□□□□ 0,74
Trav5-4A0A075B652 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19,67■□□□□ 0,74
Trav5-4A0A075B652 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19,67■□□□□ 0,74
Trav5-4A0A075B652 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19,66■□□□□ 0,74
Trav5-4A0A075B652 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19,66■□□□□ 0,74
Trav5-4A0A075B652 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19,66■□□□□ 0,74
Trav5-4A0A075B652 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19,66■□□□□ 0,74
Trav5-4A0A075B652 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19,66■□□□□ 0,74
Trav5-4A0A075B652 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19,65■□□□□ 0,74
Trav5-4A0A075B652 Gm20634-201ENSMUST00000090779 2956 ntBASIC19,65■□□□□ 0,74
Trav5-4A0A075B652 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19,65■□□□□ 0,74
Trav5-4A0A075B652 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19,65■□□□□ 0,74
Trav5-4A0A075B652 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19,64■□□□□ 0,74
Trav5-4A0A075B652 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19,64■□□□□ 0,73
Trav5-4A0A075B652 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19,64■□□□□ 0,73
Trav5-4A0A075B652 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19,64■□□□□ 0,73
Trav5-4A0A075B652 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19,64■□□□□ 0,73
Trav5-4A0A075B652 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19,63■□□□□ 0,73
Trav5-4A0A075B652 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19,63■□□□□ 0,73
Trav5-4A0A075B652 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19,63■□□□□ 0,73
Trav5-4A0A075B652 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19,62■□□□□ 0,73
Trav5-4A0A075B652 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19,61■□□□□ 0,73
Trav5-4A0A075B652 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19,61■□□□□ 0,73
Trav5-4A0A075B652 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19,61■□□□□ 0,73
Trav5-4A0A075B652 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19,6■□□□□ 0,73
Trav5-4A0A075B652 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19,6■□□□□ 0,73
Trav5-4A0A075B652 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19,6■□□□□ 0,73
Trav5-4A0A075B652 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19,6■□□□□ 0,73
Trav5-4A0A075B652 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19,6■□□□□ 0,73
Trav5-4A0A075B652 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19,6■□□□□ 0,73
Trav5-4A0A075B652 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19,6■□□□□ 0,73
Trav5-4A0A075B652 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19,59■□□□□ 0,73
Trav5-4A0A075B652 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19,59■□□□□ 0,73
Trav5-4A0A075B652 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19,59■□□□□ 0,73
Trav5-4A0A075B652 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19,58■□□□□ 0,72
Trav5-4A0A075B652 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19,57■□□□□ 0,72
Trav5-4A0A075B652 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19,57■□□□□ 0,72
Trav5-4A0A075B652 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19,57■□□□□ 0,72
Trav5-4A0A075B652 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19,57■□□□□ 0,72
Trav5-4A0A075B652 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19,56■□□□□ 0,72
Trav5-4A0A075B652 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19,56■□□□□ 0,72
Trav5-4A0A075B652 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19,56■□□□□ 0,72
Trav5-4A0A075B652 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19,56■□□□□ 0,72
Trav5-4A0A075B652 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19,56■□□□□ 0,72
Trav5-4A0A075B652 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19,56■□□□□ 0,72
Trav5-4A0A075B652 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19,55■□□□□ 0,72
Trav5-4A0A075B652 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19,55■□□□□ 0,72
Trav5-4A0A075B652 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19,55■□□□□ 0,72
Trav5-4A0A075B652 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19,54■□□□□ 0,72
Trav5-4A0A075B652 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19,54■□□□□ 0,72
Trav5-4A0A075B652 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19,54■□□□□ 0,72
Trav5-4A0A075B652 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19,53■□□□□ 0,72
Trav5-4A0A075B652 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19,53■□□□□ 0,72
Trav5-4A0A075B652 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19,52■□□□□ 0,72
Trav5-4A0A075B652 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19,52■□□□□ 0,72
Trav5-4A0A075B652 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19,52■□□□□ 0,72
Trav5-4A0A075B652 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19,52■□□□□ 0,72
Trav5-4A0A075B652 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19,52■□□□□ 0,72
Trav5-4A0A075B652 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19,52■□□□□ 0,72
Trav5-4A0A075B652 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19,52■□□□□ 0,71
Trav5-4A0A075B652 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19,52■□□□□ 0,71
Trav5-4A0A075B652 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19,51■□□□□ 0,71
Trav5-4A0A075B652 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19,51■□□□□ 0,71
Trav5-4A0A075B652 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19,51■□□□□ 0,71
Trav5-4A0A075B652 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19,51■□□□□ 0,71
Trav5-4A0A075B652 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19,51■□□□□ 0,71
Trav5-4A0A075B652 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19,5■□□□□ 0,71
Trav5-4A0A075B652 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19,5■□□□□ 0,71
Trav5-4A0A075B652 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19,49■□□□□ 0,71
Trav5-4A0A075B652 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19,49■□□□□ 0,71
Trav5-4A0A075B652 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19,49■□□□□ 0,71
Retrieved 100 of 76,532 protein–RNA pairs in 19,9 ms