Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12-3A0A075B648 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav12-3A0A075B648 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12-3A0A075B648 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12-3A0A075B648 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav12-3A0A075B648 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav12-3A0A075B648 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav12-3A0A075B648 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Trav12-3A0A075B648 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12-3A0A075B648 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trav12-3A0A075B648 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12-3A0A075B648 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12-3A0A075B648 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12-3A0A075B648 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12-3A0A075B648 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12-3A0A075B648 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12-3A0A075B648 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12-3A0A075B648 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.49■□□□□ 0.39
Trav12-3A0A075B648 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12-3A0A075B648 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12-3A0A075B648 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trav12-3A0A075B648 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.48■□□□□ 0.39
Trav12-3A0A075B648 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav12-3A0A075B648 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-3A0A075B648 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-3A0A075B648 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-3A0A075B648 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav12-3A0A075B648 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12-3A0A075B648 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trav12-3A0A075B648 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12-3A0A075B648 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12-3A0A075B648 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12-3A0A075B648 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trav12-3A0A075B648 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-3A0A075B648 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-3A0A075B648 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-3A0A075B648 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-3A0A075B648 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-3A0A075B648 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-3A0A075B648 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-3A0A075B648 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-3A0A075B648 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-3A0A075B648 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-3A0A075B648 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav12-3A0A075B648 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-3A0A075B648 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-3A0A075B648 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav12-3A0A075B648 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav12-3A0A075B648 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.41■□□□□ 0.38
Trav12-3A0A075B648 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12-3A0A075B648 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12-3A0A075B648 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav12-3A0A075B648 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav12-3A0A075B648 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav12-3A0A075B648 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav12-3A0A075B648 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trav12-3A0A075B648 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav12-3A0A075B648 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12-3A0A075B648 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12-3A0A075B648 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav12-3A0A075B648 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Trav12-3A0A075B648 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Trav12-3A0A075B648 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Trav12-3A0A075B648 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12-3A0A075B648 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12-3A0A075B648 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav12-3A0A075B648 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12-3A0A075B648 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12-3A0A075B648 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12-3A0A075B648 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12-3A0A075B648 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav12-3A0A075B648 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12-3A0A075B648 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12-3A0A075B648 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.35■□□□□ 0.37
Trav12-3A0A075B648 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav12-3A0A075B648 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12-3A0A075B648 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12-3A0A075B648 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12-3A0A075B648 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Trav12-3A0A075B648 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12-3A0A075B648 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12-3A0A075B648 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav12-3A0A075B648 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trav12-3A0A075B648 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trav12-3A0A075B648 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
Trav12-3A0A075B648 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12-3A0A075B648 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12-3A0A075B648 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12-3A0A075B648 AL845457.1-201ENSMUST00000197244 68 ntBASIC17.32■□□□□ 0.36
Trav12-3A0A075B648 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12-3A0A075B648 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12-3A0A075B648 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trav12-3A0A075B648 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12-3A0A075B648 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12-3A0A075B648 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav12-3A0A075B648 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12-3A0A075B648 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12-3A0A075B648 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Trav12-3A0A075B648 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12-3A0A075B648 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms