Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 HSP90AB7P-201ENST00000450068 2454 ntBASIC10.51□□□□□ -0.73
RIMBP3Q9UFD9 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 AC105101.1-201ENST00000623698 2873 ntTSL 5 BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 SFTPD-AS1-201ENST00000608229 5001 ntBASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 AC106872.5-201ENST00000508856 1416 ntBASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 SLC34A2-201ENST00000382051 4122 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 ANKRD13C-202ENST00000370944 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 RNA5SP346-201ENST00000363541 121 ntBASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 RAB28P1-201ENST00000411517 641 ntBASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 AL353662.1-201ENST00000439099 327 ntBASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 RN7SL834P-201ENST00000461450 286 ntBASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 AC004815.1-201ENST00000484185 331 ntBASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 AC093763.2-201ENST00000505334 1223 ntBASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 OR4D12P-201ENST00000509361 911 ntBASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 SYNPO2-204ENST00000448416 4298 ntTSL 2 BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 EMP1-201ENST00000256951 5921 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 ARL11-201ENST00000282026 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
RIMBP3Q9UFD9 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 LINC02181-201ENST00000430050 4083 ntTSL 2 BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 AL136146.1-201ENST00000529830 1667 ntBASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 PPP1R2-206ENST00000618156 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 HHLA1-202ENST00000434736 2369 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 ARG1-202ENST00000356962 1468 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 AC108451.1-201ENST00000558208 2520 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 RPL19P11-201ENST00000495944 589 ntBASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 AC008953.1-201ENST00000497334 318 ntBASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 OR51K1P-201ENST00000510214 950 ntBASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 OR51A1P-201ENST00000511110 946 ntBASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 AC004491.1-201ENST00000623029 1882 ntBASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 ERMAP-201ENST00000328249 3949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
RIMBP3Q9UFD9 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 PHF3-201ENST00000262043 8233 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 RPL34P19-201ENST00000415903 342 ntBASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 AC093267.1-201ENST00000489176 961 ntBASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 GSTP1P1-201ENST00000548078 319 ntBASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 FAM205BP-202ENST00000399773 4009 ntBASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 PABPC1P6-201ENST00000445594 1829 ntBASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 SUN3-202ENST00000395572 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
RIMBP3Q9UFD9 HERC2P2-201ENST00000613386 5181 ntBASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms