Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH9Q9HC56 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH9Q9HC56 AP000866.6-201ENST00000638898 3579 ntBASIC7.17□□□□□ -1.26
PCDH9Q9HC56 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDH9Q9HC56 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH9Q9HC56 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PCDH9Q9HC56 AC105114.1-201ENST00000624795 1862 ntBASIC7.17□□□□□ -1.26
PCDH9Q9HC56 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH9Q9HC56 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDH9Q9HC56 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH9Q9HC56 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDH9Q9HC56 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDH9Q9HC56 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 AC089998.1-201ENST00000548575 3141 ntBASIC7.16□□□□□ -1.26
PCDH9Q9HC56 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 SNORA70.5-201ENST00000365519 135 ntBASIC7.16□□□□□ -1.26
PCDH9Q9HC56 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 MYO5BP3-201ENST00000431872 1279 ntBASIC7.16□□□□□ -1.26
PCDH9Q9HC56 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 SCARNA6-201ENST00000515982 265 ntBASIC7.16□□□□□ -1.26
PCDH9Q9HC56 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 AL031777.2-201ENST00000611953 196 ntBASIC7.16□□□□□ -1.26
PCDH9Q9HC56 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 AC073862.4-201ENST00000622982 854 ntBASIC7.16□□□□□ -1.26
PCDH9Q9HC56 AC120057.5-201ENST00000623840 154 ntBASIC7.16□□□□□ -1.26
PCDH9Q9HC56 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 AL356585.10-201ENST00000641883 123 ntBASIC7.16□□□□□ -1.26
PCDH9Q9HC56 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 AC123912.3-201ENST00000600907 1367 ntBASIC7.16□□□□□ -1.26
PCDH9Q9HC56 MAPK10-379ENST00000642013 1385 ntBASIC7.16□□□□□ -1.26
PCDH9Q9HC56 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.16□□□□□ -1.26
PCDH9Q9HC56 TATDN2P3-201ENST00000452855 3665 ntBASIC7.16□□□□□ -1.26
PCDH9Q9HC56 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH9Q9HC56 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 AL589993.1-201ENST00000407450 2524 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 VDAC1P10-201ENST00000416715 891 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 AL359633.1-201ENST00000421403 310 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 FDPSP6-201ENST00000425091 512 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 FTLP17-201ENST00000432567 525 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 AC005517.1-201ENST00000452091 489 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 BX323845.2-201ENST00000458382 234 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 AL591122.1-201ENST00000487348 492 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 RN7SL776P-201ENST00000493390 268 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 RPL12P7-201ENST00000493832 494 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 TECRP2-201ENST00000503270 928 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 AP001803.1-201ENST00000525668 147 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 AC079866.1-201ENST00000534985 1220 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 AC092375.1-201ENST00000550410 637 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 AC092960.1-201ENST00000604762 351 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 AL513218.1-201ENST00000606527 391 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 NEK2P4-201ENST00000425793 1329 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 AL512310.3-201ENST00000547023 1335 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 AC061975.7-201ENST00000592016 2692 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH9Q9HC56 FO082842.1-201ENST00000423552 1370 ntBASIC7.15□□□□□ -1.26
PCDH9Q9HC56 RBMY1A3P-201ENST00000382670 1404 ntBASIC7.15□□□□□ -1.27
PCDH9Q9HC56 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms