Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL157713.1-201ENST00000379752 1531 ntBASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM48Q8IWZ4 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AC133552.3-201ENST00000572236 1869 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AL078621.1-201ENST00000272567 768 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 RNU6-650P-201ENST00000365658 111 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 MIR498-201ENST00000385134 124 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 NUS1P4-201ENST00000401550 585 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 VDAC2P3-201ENST00000430995 828 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 MTND2P6-201ENST00000455337 1030 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 NPY6R-201ENST00000503807 1112 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 NREP-217ENST00000509025 987 ntTSL 3 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AP001994.1-201ENST00000527539 826 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AC023538.1-201ENST00000534576 736 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AC091515.1-201ENST00000548110 679 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 EIF4EBP2P2-201ENST00000563883 333 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AL035417.2-201ENST00000603887 796 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AC093424.1-201ENST00000604999 338 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 pRNA.9-201ENST00000618609 89 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AC084824.4-201ENST00000620106 731 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AC091059.2-201ENST00000623355 614 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AL035555.1-201ENST00000404462 1790 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AL353795.1-201ENST00000439134 1775 ntBASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM48Q8IWZ4 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 MXI1-204ENST00000369612 879 ntTSL 3 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 FTOP1-201ENST00000419363 861 ntBASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 TAS2R2P-201ENST00000421146 910 ntBASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 RPSAP1-201ENST00000421328 880 ntBASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC7.29□□□□□ -1.24
TRIM48Q8IWZ4 AL954705.1-201ENST00000435277 559 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms