Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.24□□□□□ -1.41
H3F3AP84243 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3AP84243 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3AP84243 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.24□□□□□ -1.41
H3F3AP84243 AC022507.1-201ENST00000548349 1505 ntBASIC6.24□□□□□ -1.41
H3F3AP84243 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3AP84243 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3AP84243 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
H3F3AP84243 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3AP84243 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
H3F3AP84243 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
H3F3AP84243 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
H3F3AP84243 AC005839.1-201ENST00000624148 3213 ntBASIC6.23□□□□□ -1.41
H3F3AP84243 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
H3F3AP84243 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
H3F3AP84243 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.23□□□□□ -1.41
H3F3AP84243 RN7SKP148-201ENST00000410179 275 ntBASIC6.23□□□□□ -1.41
H3F3AP84243 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.23□□□□□ -1.41
H3F3AP84243 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.23□□□□□ -1.41
H3F3AP84243 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.23□□□□□ -1.41
H3F3AP84243 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.23□□□□□ -1.41
H3F3AP84243 RPL36P18-201ENST00000419316 318 ntBASIC6.23□□□□□ -1.41
H3F3AP84243 AC087499.3-202ENST00000441215 1173 ntBASIC6.23□□□□□ -1.41
H3F3AP84243 AC010878.1-201ENST00000456500 1047 ntBASIC6.23□□□□□ -1.41
H3F3AP84243 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.23□□□□□ -1.41
H3F3AP84243 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.23□□□□□ -1.41
H3F3AP84243 AC096754.1-201ENST00000508904 818 ntBASIC6.23□□□□□ -1.41
H3F3AP84243 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.23□□□□□ -1.41
H3F3AP84243 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.23□□□□□ -1.41
H3F3AP84243 MIR4800-201ENST00000537353 80 ntBASIC6.23□□□□□ -1.41
H3F3AP84243 OR5BK1P-201ENST00000550421 823 ntBASIC6.23□□□□□ -1.41
H3F3AP84243 AC026458.1-201ENST00000564330 438 ntBASIC6.23□□□□□ -1.41
H3F3AP84243 WDR45BP1-201ENST00000583470 1029 ntBASIC6.23□□□□□ -1.41
H3F3AP84243 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.23□□□□□ -1.41
H3F3AP84243 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6.23□□□□□ -1.41
H3F3AP84243 AC007255.2-201ENST00000604053 631 ntBASIC6.23□□□□□ -1.41
H3F3AP84243 AL353807.4-201ENST00000604995 257 ntBASIC6.23□□□□□ -1.41
H3F3AP84243 AC007204.1-201ENST00000621794 555 ntBASIC6.23□□□□□ -1.41
H3F3AP84243 AC034229.6-201ENST00000623704 224 ntBASIC6.23□□□□□ -1.41
H3F3AP84243 AC008626.2-201ENST00000624425 248 ntBASIC6.23□□□□□ -1.41
H3F3AP84243 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.23□□□□□ -1.41
H3F3AP84243 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.23□□□□□ -1.41
H3F3AP84243 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.23□□□□□ -1.41
H3F3AP84243 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 ENO1P4-201ENST00000416471 1785 ntBASIC6.23□□□□□ -1.41
H3F3AP84243 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.23□□□□□ -1.41
H3F3AP84243 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.23□□□□□ -1.41
H3F3AP84243 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.23□□□□□ -1.41
H3F3AP84243 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3AP84243 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3AP84243 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3AP84243 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3AP84243 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.22□□□□□ -1.41
H3F3AP84243 AC016251.2-201ENST00000623393 3089 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 HSPD1P4-201ENST00000547203 1702 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3AP84243 AC084782.1-201ENST00000564401 2465 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3AP84243 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3AP84243 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3AP84243 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
H3F3AP84243 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3AP84243 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3AP84243 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.22□□□□□ -1.41
H3F3AP84243 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3AP84243 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3AP84243 U3.48-201ENST00000363172 216 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 RN7SKP47-201ENST00000365347 328 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.22□□□□□ -1.41
H3F3AP84243 PDCL3P5-201ENST00000398028 722 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3AP84243 RN7SKP271-201ENST00000410528 320 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 RN7SKP268-201ENST00000411107 316 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 AC008753.1-201ENST00000423096 284 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3AP84243 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
H3F3AP84243 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3AP84243 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.22□□□□□ -1.41
H3F3AP84243 AC007365.2-201ENST00000428806 458 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.22□□□□□ -1.41
H3F3AP84243 AC018804.1-201ENST00000430381 618 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms